jgi.p|Nanoce1779_2|542828, gene_5269 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|542828
Unique Namegene_5269
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:29411..34546 +

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Properties
Property NameValue
TranscriptId542914
ProteinId542828
Product nameMetalloenzyme, LuxS/M16 peptidase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:29411..34546 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01140NO12G01140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542828mRNA_5269-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542828mRNA_5269Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|542828

>mRNA_5269-protein ID=mRNA_5269-protein|Name=jgi.p|Nanoce1779_2|542828|organism=Nannochloropsis oceanica|type=polypeptide|length=1149bp
MFRRQASASLPAVASSPGPSTTPASLRRAKSNHSFSSSSSGTIPTNALGG
SSARGWYLEDDEEEGFGDRRTRSNSLTSLGSGVVSSPLPKAISNSSLVMM
SATGGLGALARTGSCIASSGNSSSSVARFLFSSTRRWSSLLRGMEHLWEG
EEGRGGGMEMSPQDTDRSYRLIRLPNNLKAIVVSDPTTEKAAAALSVRVG
AKHDPAEAPGLAHFCEHMLFLGTEKYPRENTYKDLVSKSGGSSNASTSMD
LTLYKFESSADAFEDVLDVFAQFFICPLFTESATARELMAVDSENSKNLI
ADSRRLLQITKAVAEPSHPWAKFSTGNLQTLIRPGFDTRRALLALYEEHY
HASKMALALVGRDSLDVLEAMVREKFSAIRDEKGGEERGREDAMPFQNPF
PPPAIPLIRVVPLRDMRELRLSWPLPPSRPHYRSPPTRLLSHLFGHEGEG
SIFSVLHRVGWASGVHAGLGTSQEEFCLFECTVALTEEGRRHWQDVVSLV
FQYAHLIGQASPEDLSAMWDELGVISSTSFRFQQKAQEYAYAPDLARRLQ
HFQDRHILSGGHLYDSLDLTALGDCLAGMTEEKALLFLICKENEQEQQQP
PPPSSSSSSSSSSFSSLIEPWYQIPYTLTLLPSHTLRSWTCAHVDSLHLP
RPNPFIAEDFDVLSPLSSYEPPSATPSPPTRVLQTPSVEVWHKIDRSYRQ
PRAYIVLEFASPTVQRDPGAAELLVRYVEHALQESTYDAIVAGLGWSVGT
SNNGLTLRFSGFSHKIQTLLHKVLESLLSLSLHEGLFALIKEKQIDAYNN
IALARPDEHGQMFLSLLLTEGRWAWRDKLRRVEGMQMGDLAAFHKEMLGR
QNCVKVGVFGNVSEESALGVGEQVERLLRRNGRFEPLSPSVQPHTRVVML
EKGIDYRLRAPVPNETDVNSSLTTYFQAGLVSPSQTAALILLAQIIKEPC
FTQLRTQEQLGYVVASGVRLTWFRSLVAGISFRVLSKTHGPDEILNRLEA
FLLQVQSLLSSLPPAELERHKKALITNLLEPPKKLVGEAGMHWGEIVNET
REWRRNRLYVEGVETTRREDLERVFGEVCLGLGREGRRSLSVMMYGKNHR
MVEEGEMGEEEGGREGGRAVWFREEDWLAFRMSRPLFPCSPTVLSSKY*
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Synonyms
Publications