jgi.p|Nanoce1779_2|542807, gene_5253 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|542807
Unique Namegene_5253
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:854756..856906 -

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Properties
Property NameValue
TranscriptId542893
ProteinId542807
Product nameoxidoreductase FAD/NAD(P)-binding domain protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:854756..856906 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008941nitric oxide dioxygenase activity
GO:0016491oxidoreductase activity
GO:0005506iron ion binding
GO:0020037heme binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03360NO11G03360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542807mRNA_5253-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542807mRNA_5253Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|542807

>mRNA_5253-protein ID=mRNA_5253-protein|Name=jgi.p|Nanoce1779_2|542807|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MPPASSPISSPTSSAVPALPVLSAETKATIKSTAPLLASHGPTITQAFYP
LLFSRYPSVKQLFNKRNQAPEADGSPPRQPQALANAVWAYAANIDNLGAL
SAAISLIAHKHASLHVLPEHYPMVGECLLAAIEQVLGKEVATEGVLSAWG
QAYGFLAAVFIQTEDGLRAKNARKRHGWVGWREMKVARKVKETVDVTSFY
FTNLDETEPVCSFMPGQYISLKLTMPNGEVEERDYSLKGNDMSPPYFRIS
IKRLPGGAVSTYMHDTVKEGDVLLVGPPYGDFTLPPALPPSNSTPTRRPL
VFLSAGIGITPLLCMAEAALLGCAAACKGGPPSLPPSLPPKVFFIHTARD
KDHFPFAARLQTLGGKEGGKDAGCMWGSGRLTAATLHEALGTTARPQDCT
FYFCGPTEYMVGVRRLLAWLGVPAEEVQYECFGPAVTEIEAAGVVPSCY*
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Synonyms
Publications