jgi.p|Nanoce1779_2|671366, gene_5247 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|671366
Unique Namegene_5247
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:835800..844061 +

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Properties
Property NameValue
TranscriptId671452
ProteinId671366
Product nameP-loop containing NTP hydrolase pore-1-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:835800..844061 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03320NO11G03320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671366mRNA_5247-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671366mRNA_5247Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|671366

>mRNA_5247-protein ID=mRNA_5247-protein|Name=jgi.p|Nanoce1779_2|671366|organism=Nannochloropsis oceanica|type=polypeptide|length=2047bp
MMMAGEEDDDLLAMDIDGLVQTAYNDRGEQRKAEEEEARLEKEKKVAEER
AEAERIAAVLAKAEADAAEAARLKDEETQAAAAAAAAASARTIATGRING
KRKTAALKVAKRAIKPDPDSRKKAVMEEEEEEEVEEDDRRRKPLSHERNC
SSQRRAGRLEARGTVTRDDAKVKVKVEEWKEDKKEGGAGGEGKEEEVEKE
VIARQRKGRAGGRALRGNAAAAVVASPATGGCDAGAIGKRKAPGCGYHGG
VVNIEGGGERGRRRGQVGRRRGGGGRAVGPLDLANAEEEGENKGAEDEED
EAEDEEEDDDDDNNDDDDDDNDDNDDEKEEEAEEDEEPPKEGGEVSTVFT
SYKPKKLTIGRPHPAKVVETSVLARAEPPDIWYKLHPGMDQIVQDGRLSS
AQLESIIYATQQHERTVVNGEEVGGYFIGDGAGMGKGRTIAGLILENWLR
GRRRHFWFSVSNDLYVDAQRDLTDVGAGHIPHVSLNTLSYDDPRLDTLEG
IVFVTYTTSVGRTRFDEGQTRVEQLVRWANRWGKEEFNGVMVFDEGHKAK
KLLPEKVENKGFGSATTKSSKTALSVSEIQKRLPKARVCYVSATGASTLE
NLAYMQRLGLYGRDNGTLFEDMDDFFNESGFKSSMGALELISLNLKSQGK
YNARALSFQDTTFKIEQVPLAEEFKSKYDQLVAVWNEILEVMNYAKMDLA
TGMARYHPHQHVDKVFLPAHLKSFIGNFWSGHLRFFRHICVAAKIPHVTK
LAQDAIREGKCVVIGLLSTGEAVAKRYVKNRATCAGRTALGDEGGGREGW
GRGERPARRSAKIVKSYTAMLGSDSEDEEKNEKEEGKEGGMKMEVGAGGE
GGGGGKGTAKAKSRRSSASSGALDDEKDEEYKGESHEEEEEEKEEEKKKQ
GKQLKTTVAETKGKRRRSSRAGSFDSGDEDEEEDEADLDEVDADAGFVGI
ESTLLDLIKKYVPDQGLCRDADVPFNYSAKKAYLIDRVRAQELPQFPLDD
LIRLLGGHGKVAEITGRKCRLGFDRDGNPIEVSRAKTLGVSQKRVNIEEM
RAFQAGEKLVAIISDAGSTGISLHADRRAKNQRRRVHMTLEIPYNSSSFV
QQLGRSHRSNQVSGPEYMTVVTDLPGEIRFAATAAKRLGQLGAITQGDRM
ACMGSEEMQAFDLDTKHGLQALQVFLRFVLAEQEIDEKYMPARIREHPQP
EVEKARFQKFLQENLSLVDLAKPLAKELILNAGQNVRRRSNAKARGTSSI
TISRLFNRLLALSVDAQHEVFDFFELIHQQILEEAKSQGTYDTGVTDVYA
EQILDVKKTELVKLQGVPLTLYTLRLDRGIPFVKAIEIRDDWYAKLGKLR
AEEERAKERAAGGNSVPMITITLNKKCKYAVKGGDGGGSRLLGSIGWAGD
EGYVNDEVEPDGSLYDGSGTGFYVHLTHPDQVILALEIVSSAFSRRKLKA
GSLGARMEKRYKVISPNTGHRGIGPYYHKEFQIAGSELQRQWVKVKPARK
NLEMVERKWTRFNELTLKQCIHHARGQRREWRTNADGRRYEVVGDVMCWC
NPNNANYSHSRGGTFCPVGRRQSTSYILSGAVVPIWPAIQDVVIDNRNKY
IQVVRCVTQEERLVGLDIKQGQKRELMAKLEEFMEALGLPLKEEVNQQAL
TVQQAEKHDDKGNVGDERCGSANGGSSGEGGGGGGGKSEGGGGGGGGGGG
GRAGTITGSASNSRSLNLEDRIILKTLDLLKMKKRASASSSREGGARDGS
GGGSKQEGGVETEKKEEWQMRIQANARYEKECLERKRERKQLAAAQARIA
MVAAKPAEWAAYFGSEEALDTVARTVGSDVSSAAVALSSVAKSITEQRSP
LRLPTLGFSPTSASATRHLTTTTSAARGGAGDLSVCGDSGGDEPLFHSSL
RRLSSRAQASNSAAAARSTSFSTAAMTSTVVAPVSASAAGAQPGASTASC
TSSDGDGGGRGGSGDAGEEGGRREGERRGGGATSMASPTVVAASAQRGIT
DYFARKNKGCGGGMAAPTLKRAPAAASVRVLLPANRDEECEIIDLT*
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Synonyms
Publications