jgi.p|Nanoce1779_2|58053, gene_5188 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|58053
Unique Namegene_5188
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:687986..690528 +

Link to JBrowse

Properties
Property NameValue
TranscriptId58139
ProteinId58053
Product namenucleolar protein NOP5
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:687986..690528 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02870NO11G02870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|58053mRNA_5188-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|58053mRNA_5188Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|58053

>mRNA_5188-protein ID=mRNA_5188-protein|Name=jgi.p|Nanoce1779_2|58053|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MLLLFETSAGYALFKVLKEAKLQDVENLWKEFENPEKASSIVKLKAFRPF
DSTAEAVAAATDMIDSNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLI
KDKLGLNIATGEMASELFRGVRTQLDTLLTGLSESNMKQMQLGLSHSLSR
YKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKVV
NDNIQYAKIVVRVGMRTAIKSHDFSDILGDDAVEQSVKESAEISMGQEIS
DNDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGAR
LIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLI
GQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTTMGQEARAKVEFRLRQ
LEGGHKTTLTGGSRSSTGAANGGPAKRRRRKRERGSRTTRRKQQLLRMER
QRKRRRHRRKKVRRRARKSRWWRTRKTRKARRRRKRTRRRTSKATVGRKV
VRVCGRKAFRDAVRKEVKKQEGGGLAYAQERSKSLPTRTSKRREWIDQ*
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Synonyms
Publications