jgi.p|Nanoce1779_2|555972, gene_5066 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|555972
Unique Namegene_5066
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:369850..376229 -

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Properties
Property NameValue
TranscriptId556058
ProteinId555972
Product namenon-SMC mitotic condensation complex subunit 1-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:369850..376229 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01790NO11G01790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555972mRNA_5066-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555972mRNA_5066Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|555972

>mRNA_5066-protein ID=mRNA_5066-protein|Name=jgi.p|Nanoce1779_2|555972|organism=Nannochloropsis oceanica|type=polypeptide|length=1711bp
MATLELEGATVEALEALGLGQLDTLETANTVIGGDLMDLLDTTELPPATA
WRTFNEFLEEWKKVNDGGEFWSLVSKSWGGDTGTGHRALLALLHLAFRTK
DKGEEPWLAAKTYVWLMDLPGASAYGVFNGAMFRSLLALVKSWVESAAAG
GATVAGAGDTSSTSSSSSSQQHQQPTAAASTTGRSRRAAAARSRTVSQQQ
AEREEEVEDDDDDTEDEGRGGRRGKARTGKRTTSNKNSTAALINRGLESL
LLALHGSLTTGSLAASLCAHDDVQGELTDLVLAVYSLAHPAAGSLAQATR
GVLMALITVAGGPGGNPIVLRALMPLLTMKPSRNGLPTDAKTRTGAHQRA
VQLLTVLIKEGEEQKKRGSDEVAVEEGEGGEERREDGEDGGDPMEVDVGD
GAVEEEEQALVEEGKKEKGKQAGKKKGKKSKRGATEDDEGDEEDANNTAK
STHADETDPSQRREGSKAATAKQRMEVPKDLHMTVLAVLEHMCTEAPDRA
DVRSRLVDSVLTLLESLQQSAPELGPRFILFLAKLIRSVKVSHRAFGVEI
AASFVNAPWAWPSENEIAFAEEEREEGKRKEEGKTARDVWTSLVALVESF
ASRVVDKAPTVRARAMVCLSEMLLSVQEEAAPPGLREAILGLAFPNSPHN
TLGAAAAEADGAEGGNDAVVPTPQDLVGLVRSRCQDDKAVVRKAALQALE
ILLTTGASRGGGKVGMVDVELFAVRCNDVSVLTRKQAMASLSSLLLADPG
NALLQSTWVKAVLPLVADPEQSILNRLVDLVHEELMDALQTAALASIDSS
STTTTAATTGAVAVVEDPTALRRGAWALLEAILASDRAASALLPSGSSSS
SSGGGKVMPSDPAFVITCWRRAFEGLGGEEEAEALEEDSRKILRVLARIA
PDVPAEVGMGLAEELLGYLRGLHPGLSPENCGAALETISALSLAKAQTLE
EGAVIIRKAAGEVLEACEKVLRRFVVGPEEGGKERGGEGGRKEEGRHISA
EERRKLERATFLVGAVAILGFSPNEEESKSVAAVAAASAAEKGRKKKKAE
APAAGTPGGGPLIRVPVPAATVSLIRVLLLPEILPMEEAKKIHEEGGREG
RISPEGTVAVPVPDSVRAHAFLALGKACLRDKGLAKENVNVFVRELSVGS
SAAIKSNALLILGDLCVRYTSLVERHVPSMARCLQDESALIRRHALALIS
QLLLQDYLKWRGLLLHRYLAVLVDGDMRVAEVADYMIFNPLLRKCPSLFV
NHFVETLVVLNGCVDHDAYKAALSQGAESGTAVTMEGVDLGGEGGTAKKR
MHIYRAMLQHMSDEQRIQVTAKLTQDILGAATDEDGEAGGIKIQSYHRAS
RFAQGQRREAALKKLKRDENLVRDALAVLRCPDIKVAGGRWGGGGGGEGG
GSTQDEDAEALMAEDGSGGGAEAAAAAKGRLLSKVSRKHLLEHVVPELVS
LKACLERAHSPLIRNVMEYFLELMRHNKEEVKDALSANPTLFHEIEFDLQ
QFEKELKAQAEARAAMPPPSLSPKSPADALPRRSVGSSSSSSSYSGSNRV
SSSRRQSSFGVGRTPLQARMSNSNSNSSTSNSGNSGRRTTPRLSDCSAPR
LRRSSVGANLSRTPSEAIKAALQPGGSGIASQSFTPAVAKRGEGSVSGGG
GEGGRVEREGERHVNVELPAAMKTWNVTVGRSPLDSKENRGEEEEEEGGE
EQVDAGMVDV*
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Synonyms
Publications