jgi.p|Nanoce1779_2|591222, gene_5046 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591222
Unique Namegene_5046
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:319312..321124 -

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Properties
Property NameValue
TranscriptId591308
ProteinId591222
Product namealcohol dehydrogenase zinc-binding domain protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:319312..321124 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004022alcohol dehydrogenase (NAD) activity
GO:0004023alcohol dehydrogenase activity, metal ion-independent
GO:0004024alcohol dehydrogenase activity, zinc-dependent
GO:0004025alcohol dehydrogenase activity, iron-dependent
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01610NO11G01610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591222mRNA_5046-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591222mRNA_5046Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591222

>mRNA_5046-protein ID=mRNA_5046-protein|Name=jgi.p|Nanoce1779_2|591222|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp
MSPPTAAAHHLPACMLAGVADHHGDRFDMREVPVETPGPGQVLVKIVTSG
VCHTDVHAVDGDWPAPTKLPLIPGHEGAGIIVAVGPDVSSTIAAVGDRVG
IPWLHSSCGTCEHCLSGHENLCPKQDNTGYSVDGCFAQYTLAPAAHVAKI
PDAVSFEQAAPILCAGVTTYSGIKATEARPGQFLTVIGAAGGLGHLAVQF
GVAMGLRVLALDCGEDKLKFCTDTLGAEAAFEAMDPEVAAHVTKATNGGS
HGVLCLAPSIGAFKSAVGLCRRGGTIVMVGLPKGDMPLNIFDVVIRGITV
RGSIVGTRKDLAEALDFAAQGKVNCHVDVHPFKELNQMFDDLRSGKVLGR
IVLNVSGD*
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Synonyms
Publications