jgi.p|Nanoce1779_2|528700, gene_5014 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|528700
Unique Namegene_5014
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:244215..246074 +

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Properties
Property NameValue
TranscriptId528786
ProteinId528700
Product namerna polymerase i-specific transcription initiation factor rrn3
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:244215..246074 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528700mRNA_5014-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528700mRNA_5014Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|528700

>mRNA_5014-protein ID=mRNA_5014-protein|Name=jgi.p|Nanoce1779_2|528700|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MAEKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILAT
HRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALA
YLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIMMLLAKHEE
EEEGEEEYGWGAVKKEEGGCGLAGEEEEEDGEEEGTGRHVLFYSICQAVF
YVVGFHHSTLDGEDILGVGLGSESAAAALGLKMRLGRLACSPLRPLDHCL
ESVKREFLRLAHLHAFVPAGALVGLGWGGGGEEEVQATRRNNHNPLDSYF
PFDPYLLRRSSRFVATPDVYRYWQQQQQQQQQQLQRLSTVKKEEGEGEGE
EQWEGRNSSISSRGSDEEVENDDQERGEEEEDMEAEEEDMEAEEEDMEAE
EEDDVMSMSVASTGNARKKEKTKTKEKKEKDSQGGKGGGKNGLHSRKRER
VDSMDYDQDGFGEEEGEEEEEGEVDGEDGTDDEEGERAPAAAPAAMARTG
LLLSDHVVEAAAVAAAAQARVRKESVSSVGSW*
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Synonyms
Publications