jgi.p|Nanoce1779_2|666503, gene_4788 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|666503
Unique Namegene_4788
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:623666..633654 -

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Properties
Property NameValue
TranscriptId666589
ProteinId666503
Product nameSec63 Brl domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:623666..633654 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02290NO15G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|666503mRNA_4788-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|666503mRNA_4788Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|666503

>mRNA_4788-protein ID=mRNA_4788-protein|Name=jgi.p|Nanoce1779_2|666503|organism=Nannochloropsis oceanica|type=polypeptide|length=2214bp
MSLEFEQQKKYDYKANSNLVLEADRSGDGGRRRKDEGTGEVEVWDEAKLA
GKRMGDRVGGRTRAPEVEERLKKSKEKKEREFRGVEGRKKKSGGKGKEGV
FSAGRGATVLTETEALEAINYRPRHSESKRAYEEILSLIQGNIGDQPQDI
LRGAADEVLAILKDEKMTDPRRLVEIEKMIRKVGPEKFNKLVTLGKAIHD
FNVGGKGGREGGGEDGEEEEEDKMLDEEMGVRVEFDRDEEEEEESDLDEV
VEEEDDEEEELGEGEEEGEERERGRPGGVRAARDASEMEVEDEGEAAMRL
SVHDIDAFWLQRQLSKFYEDANISAKLAEDVLAILGGRDELDCESKLVVL
LDVDKFDFIKKLMKNRGKVLYCTRLKQAQSDAEKKEVEGEMLADLELGGP
GILKELYQKASAESWAADRQGEFEGGMVKVGGREGKKPQQVLDLEALGFS
QGSHLNSNKKVVLPEGTWRALKKGYEEVHVPAIKHLPDEGERLVDIDELP
EWTHKAFEGMTTLNRVQSKMCPSAFYSSENLLLCAPTGAGKTNVAMLTML
NEIGQHVREDGTVALDAFKIVYVAPMKALVQECVLNFGKRLAPFGISVRE
LSGDQSLTRAQINSTQIIVTTPEKWDIITRKAGDRTYTQLVRLMIIDEIH
LLHDERGPVLESIVARTIRQIETTQEMVRIVGLSATLPNYEDVATFLRVN
PDKGLFFFDNSYRPVPLQQQYIGITERKAIKRFQLMNEICYEKVLEQAGK
NQVLIFVHSRAETAKTAKALRELAIENDTVGQFVAEAGASKAVLMHEAEQ
TKNEDLKELLPYGFAIHHAGMNRADRTAVEDLFAAKHAQVLVSTATLAWG
VNLPAHTVIIKGTQIYNPEKGRWTELSPLDIMQMMGRAGRPQYDSSGEGI
IITQHSELQYYLSLMNRQLPVESQYVKKLTDNLNAEIVLGTVQTLREAVH
WLGYTYLYVRMLRNPALYGVGVEEAEKDPLLEQRRTDLLHTAASTLDKNN
LIKYDRKTGAFQVTALGKVAAYYYITHQSMAVYADYLKPTMSDIELFRLF
SLSSEFKNIHVREEEKLELAKLAARVPIPIKDSIEDSLAKVNVLLQAYIS
GLRLEGFALVADMQYVQQSANRIMRALFEISLKKGWAALADKTLNLCKMA
ERKMWLSQSPLRQFRAIPEAIARKLEKKDISWSRYFDMTPQDLGELIKLP
RMGKPLHQFVHQFPKVELSVHVQPITRSLLKVELTIHPDFVFNPDVHDNG
VLFWIVVEDVDQEVILHHESFLLKAAFAGDEHVVNFTVPILDPLPPQYFV
RVVADRWLHSETVQPISFRSLILPNKFAPHTELLDLQPLPISALRAPEFL
EPVLVRRGLTHFNALQTQAFTELYDTENNVLMCAPPGSGKTLCAEVAMFR
LFKQQAAGEGEGGMEGKVVYVHSKKEVVKQKYEEWKESFGEGGLRKSVVM
LTGDATLDNSLLEGADIAVSTVEAWDVLSRRWRQRKSVQQVVLFVADDLH
LVGSAGGSTLEMVVSRMRLFPFELERKVRIVGLAACVANAKDLGDWIGAT
AHGLFNFRPDVPGVRPVPLEIHLQGFEISHFSSRMLSMAKPVFNAVVGHG
GREGKPSLVVVPSRKQAQLTAIDLITYAAAAGTPRQFLHLPGSAGEKEEE
CVGEGVKEVVLRDVLKKGVGFVHQGMTEADQRRVWELYEGGMLQVVVVPH
SLVWSVTVKAHAVIVMGTEYYEGREHRYVDYPMTDLLQIMGLASREGKDK
LGLCVVMCHATKKEFLKRLLYEPLPVESHLNHFLHDHLNAEVVNKTVETQ
HEALQILTWTFFYRRLVQNPNYYGLRAVGSRQLSEYLSDLVEGVVEDLAR
AKMLEVEEDVNLSPLNLGMIAAYYYVQYTTIELFASSVTAKTKVKGLLEI
LSSASEYGELAIRQGEERVLQTLATRLPQKLPEGARFTETHVKALILLQA
QFSRMALPTELRQDQRMVVGEAPRMLQALVDVVSSECWLKPCIAAMELCQ
MVVQGLWDKDSYLMQIPHFTKEIVKRCEAYEGGEGIESPLGILELEDEVR
EELLQLPPAKMADVARFCNTYPNIDLEWEIAGGADQVVAGKPVSVVVTLE
RVADEDEEEGEGGGMVVAPLFPKPKMEAWWLIVGDPARNSLLFIKRVNKI
TKRTRTKLNFAAPAEAGDHDLKLFFICDSYMGADQEYDLSLSVLPGEESS
EEESEGEGMEVDK*
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Synonyms
Publications