jgi.p|Nanoce1779_2|587504, gene_4683 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|587504
Unique Namegene_4683
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:381597..384099 -

Link to JBrowse

Properties
Property NameValue
TranscriptId587590
ProteinId587504
Product nameglycosyl transferase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:381597..384099 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01400NO15G01400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587504mRNA_4683-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587504mRNA_4683Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|587504

>mRNA_4683-protein ID=mRNA_4683-protein|Name=jgi.p|Nanoce1779_2|587504|organism=Nannochloropsis oceanica|type=polypeptide|length=510bp
MKFRRRRSSKGVPSAGAPPPTFSHSLLSSWFAGKPAVAEKRRGAPAIDAA
MSGMGTGQKPRLREQHAICMVCDFFYPRMGGVEMHIWSLAQCLLKLGHKV
VIITHAYDDRKGIRYMNNGLKVYYCPLLTFFDQDVWPTLFAFFPLFRSIL
IREQINVVHTHQATSVMSIECALYARTMGYKLVYTDHSLFGFADAASIHI
NQVMRFILSDFDHGICVSNTCRENLALRARLHPIMLSTIPNAVDPDKFTP
DPSQRRRGDGEDGRINVVIVSRLVYRKGIDLVAKVIPVICARYPRVHFIV
GGDGNKKLLLEEMREKHQLQDRVEMLGRVPHVHVRNVLVRGHIFLNCSLT
ESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMTKFAEPTAESIIAAIGA
ALPLAEKVVPAEFHQRVRHMYSWMDVARRTETVYDRVRESTMPTFAERLW
RYSTVGGTVAGWLCCFTVSVIYLVWRIIEWVWPRDGIELASNFPTRQHME
DQKSDHGRR*
back to top
Synonyms
Publications