jgi.p|Nanoce1779_2|554589, gene_4677 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|554589
Unique Namegene_4677
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:356789..361896 -

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Properties
Property NameValue
TranscriptId554675
ProteinId554589
Product namecobalamin-independent methionine synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:356789..361896 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:00038715-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008652cellular amino acid biosynthetic process
GO:0009086methionine biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01330NO15G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554589mRNA_4677-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554589mRNA_4677Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|554589

>mRNA_4677-protein ID=mRNA_4677-protein|Name=jgi.p|Nanoce1779_2|554589|organism=Nannochloropsis oceanica|type=polypeptide|length=765bp
MSVKTSTIGYPRIGPNREMKKALEEYWAGKSSKEALIAVAKQVEESAWKA
QADAGVDFVALDGTCYDQMLDHCTYLGLLPPRFQELSGLDQYFAAARGHP
PAITALDMSKLMDSNYHYLVPELTADSAPQPNWAPFLDAVRRGQATVGKD
KACPMLIGPVTFTVLSRGDFDRSTVIQRLLPAYQSVLVELAKLGVPEVQF
HEPVLALSAASLYQADVELAYKSLTGSVPIHLVVPYDDVAPEVYPWLVAL
PVHAIGLDFCGVPGAPHGNATCQLIAKNGFPADKRLGVGVIDGRSPWADD
GTAIKVVAALRKLLGPNQAMTVQSSTSLQHVPIDVNLEKELPSDVKARLA
FAQQKLGEMVAVKEAVSAQLSAGAGDLNLSTYTGAPSAGPTAKSIPADFF
KRPAPFAERRPQQPQFHAFPTTTIGSFPQTPAIRRARLQFKKGTISEIEY
RERIGSEIGYSIGAQEALGLDVLVHGEPERTDMVEYFGMKLKGYSFTQHA
WVQSYGSRYVRPPLITGDVSRLGPMTVHEFELAQSMTNRAYVKGMLTGAV
TCINWSFPRKDITRSEQAYQIALALREEIADLEKAGCRIIQVDDPAIREG
LPLKTNRQAAYLEWAAASFRLSTGVATSACQIVTHLCYSDFEEILGAIDA
LDADVLTIENSRSGDDMVKALATYGYSRDIGPGVYDVHSPVVPSVESMAS
KARAYVAAGIDVSKIWLNPDCGLKTRRWEEVLPSLRNMVSAAKLVREEMA
AGGKSQVKGVKGAH*
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Synonyms
Publications