jgi.p|Nanoce1779_2|670406, gene_4614 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670406
Unique Namegene_4614
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:198588..203529 -

Link to JBrowse

Properties
Property NameValue
TranscriptId670492
ProteinId670406
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:198588..203529 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00640NO15G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670406mRNA_4614-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670406mRNA_4614Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670406

>mRNA_4614-protein ID=mRNA_4614-protein|Name=jgi.p|Nanoce1779_2|670406|organism=Nannochloropsis oceanica|type=polypeptide|length=1116bp
MADAGSTQRKKKKRVIRARDDGSDESDDDMLDLQTSSTTTGNAATTTSRP
RAVPPSPSLQPPSKAAEVKSKKKKIKSEEVPAVPPSKPVDPRQAGQKAAA
AIMAAVAAVKLKAPRSPPLPKKRKLPTELPASLSSSSSSFSSLPPSSSSS
SSLPRKGAKDPNAVEEAASTTLLDPSIDAGRGTGTHKPKRPTMARPLSSF
PFSLSASSSSSSTSSTSASFRSPSGGDMMTNRDKEVGKTRADFDRELLDW
DFLTAWEEEIKPVPSSYSNANGKGEDEEDGREGSEEESEDGKMNGSPKPV
QRWTPVPDTFTSASHYVDVWFPLLLQEMRAETLSDIGTEGVGPFTKVQTL
RALKFEGLTAEEQQVQQMLVGREGGGEGGRRKLRDCYQWDLVLLVRKMEP
VWEAASLPSGGSVGGREGGRITLYGCYLTSLVSSIREISALLNAVDAAFA
ELGEGFGKAVLGKFNPSQVGAIKAAATNKGFTLIKGPPGTGKTTTLKGLL
NSLHLREYQKFYKGVLAVAGAEDADTERAWSKYREKKPHILVTAPSNTAV
DNIVLRIMEDGFVDGQGNRYNPPLVRMGRFSSDKVRVVSLDQQVDSLLSE
PDASLRQRCLQGRHLLASLKQALALARIKFRMLSRAMEDGWGGREGGREG
GRVLPFGWDVRVEDTGVVVFFAPETGQSSLEFPSVPVLGGREGGVDECPG
RRLEQLGQYQALCGEVTRIVEQVENLGLEVGRGEIRLQGMGPGAGPERLR
GELETNFLDSAHLVFTTLNTAGMPSVCSGNKFTVVVVDEAAQAIEPSTLI
PLQTGAQTCVLVGDPQQLPATVFSSLGASTAFERSLFERLEHGGHPVHLL
DTQYRMHPLISAFPRLHFYGALLKDGENVFSPSYTRPWHTLTPFQPFTFL
NLRSDTDRGAKGGGGGGGGGGLSSSYRNTAEARLIVNVYQTLKREGGREV
KGKVGVITPYQAQLLELNSQFARALGPGYLEEVELNTVDGYQGKEKDIIL
FSCVRAGGKKGIGFLADVRRMNVGLTRGRLNVLVVGRAETLQQNKHWRAL
LEHAKRMGAFQQHHYQQQQEQQQLLRDPPPPPNPYLMMLGQIQQQQQHQQ
QQQQEQQPRPHNPPR*
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Synonyms
Publications