jgi.p|Nanoce1779_2|587002, gene_4573 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|587002
Unique Namegene_4573
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:33169..36318 -

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Properties
Property NameValue
TranscriptId587088
ProteinId587002
Product nameUbiquitin carboxyl-terminal hydrolase, family 1-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:33169..36318 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00200NO15G00200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587002mRNA_4573-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587002mRNA_4573Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|587002

>mRNA_4573-protein ID=mRNA_4573-protein|Name=jgi.p|Nanoce1779_2|587002|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MADNWCTIESDPGVFTEVIENFGVEGVQVEEVYDLDSASFAPLEPVHGLV
FLFKWKQEQDSRPVTDAMAEPDLFFASQVITNACATQALLSILLNAPSDK
VEIGPTLREFKSFTSQFPPDLKGLAISNSDTIRQVHNSFSRQEPFVIEET
KATEKDDVYHFIAYVPFNGKVYELDGLKPGPILLGEGEDWLSIARPAIQA
RIERYASSEIRFNLMAVIKNRTLVAQGKTERHQRRLDHIKARLELLETGG
TAPPPTSDEDDPAFALATTADELRQQQAEEASTLDDLKRLIDDEKRKFTA
WKEENVRRKHNYIPFVMGLLRVLAEKGKLKGMVDAANKKAADARAAASAA
TSKAN*
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Synonyms
Publications