jgi.p|Nanoce1779_2|23447, gene_4409 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|23447
Unique Namegene_4409
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:514613..518463 -

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Properties
Property NameValue
TranscriptId23533
ProteinId23447
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:514613..518463 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015969guanosine tetraphosphate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|23447mRNA_4409-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|23447mRNA_4409Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|23447

>mRNA_4409-protein ID=mRNA_4409-protein|Name=jgi.p|Nanoce1779_2|23447|organism=Nannochloropsis oceanica|type=polypeptide|length=1076bp
MNPAAAAVAAAAAAVAAAAAAAAAAAIQLPLQESHGRLPFPLLLILLASN
LPCASPFMLPASGPSPPPFPSSLPSPTWVTKTCRTQTTTMMVYVPPPPPP
QSEIDASAPPPSTYAYSSSPSSGWLDAWSLLLKEIRPPIPSGAPRSFVEL
VRTDRQGRKRTLSPAVKDAEMRESVRRFWRILSPELGYLTTDEVARVKLA
LEVSCLAHQGQKRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTAE
DTHLRLEEIGEIFGEGVRQIVEGETKVSKLAKLGSSTADYEETQAENLRS
LFLAMCNDYRVIYVKLCDRLHNMRTLQFMSPAKQMKISRETLDIYAPLAD
RLGVRGLKSELEDIAFRYVYPKESEEISAMLANRSDGYEDVLASTHIALH
QMLERKLLLDQPKPLNLTVTGRLKEKYSLWRKMDRKAKEVGKPVSLDDIK
DVVAMRIVINVDRQPDEPESEWKGRGIYLCFRVMYLVQRHLSASGYKSTV
EDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYK
DEQRRISGPGGSSSSSSSSSTSTSGVSSGSTSHYRTAWLTCLKDWQTEVN
ARDFVEAVRAEILGSRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHL
RLAEVNGRPVSSLGYVVQNGDVLYVVATRNAKPSVPWVRAAHCRTTRGKI
RTYFRTKEHGVAEEEGRRLVQALLVWNQVFLEKKLGTLPTPEDLERSVKS
FTGYASLQEVYFQVALSVEPHETGAMLGRVLGLDAESAHELDLTPLMDRG
PEEEGEGYRKERGEEVRFSARGEQEPVYLLSHNGRETYRLCPCCRPVDGD
PLTGLRVWEMPHGEVTVVHRADKACPLLQAGEEAMLGAVGGENASSSMVR
ARRVDVDAEKFNMDDDNGYFPVSVEIGARREQLYVLSNLVASLEAAEAML
LDAALGVSENKSSSRRGGIGIPSSGAEEMHEMENEEEEGDDDTLVIRFLI
GVHNLAHVERLLAGFKAVAGVLSAARSDMIGPTKDPRPRGVREHDAHQLG
SALEEVLVPEMEEEIKTERDYEFTV*
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Synonyms
Publications