jgi.p|Nanoce1779_2|22766, gene_4382 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|22766
Unique Namegene_4382
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:448432..453979 -

Link to JBrowse

Properties
Property NameValue
TranscriptId22852
ProteinId22766
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:448432..453979 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01700NO09G01700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|22766mRNA_4382-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|22766mRNA_4382Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|22766

>mRNA_4382-protein ID=mRNA_4382-protein|Name=jgi.p|Nanoce1779_2|22766|organism=Nannochloropsis oceanica|type=polypeptide|length=1406bp
MKGGVGGGGEGEREGEGGSRLGRSAPQAREMMASLISRSQQSLDKEEEVE
EVEVNGGGQRRRAGALDALFGVGKRHVPRKVQNGQHGDRWGVGREDEVED
PPPRPPSGPDRGGGRKGAGGKQPQQQQPQQKKKKTKQQQPQQQLDSIGAI
DLVSSDEEEAEALKEGEGGGREGGKEGQGPLRNVCLRSDVVFTGTVASDC
TASDTPSSIAGAVAAASVAAAGGTGTNHIRWDEWPLFNCSLKVDTFNRKV
VISWGPTETNAPVLRGEKLLSFQHIDAFHVHGPYAELNGRCLLLLHHHHH
DHSSSAGPSSTLAGGLSACPPSRPPSLRLLALPFHPLDRAGKTQAGLRNI
LPVTNRENLQILQAHMETEKEGGAVGWFRLWSEVEGAMRSEVQEVMAHIA
SRQGTRTARELLKEVRKEIDGDEAGGGEDGEGGTAGGEGNPWVRRSSRRS
TRESSKEGLYKYRDAGGRLLPGEGEEARLLFKFPFYRDAADRVSITTLDR
ERIQPGEFLNDSVIDFYFKFFLVERLRERLVKKEGERRKRRTEMREGGKG
SRRVVEEGQEGGQEDGKGRNFFLLQGKEEVEGEEEEEHERVWREVYVFST
HFYSKLTEVPLVVRVPSKQQQQQQQHMGLALSVERRKGGKQGRQKAKEKS
GLSVEVEGGEDDKEDIGVLMEAEKKLKEKGRITEGEEVKEEKEEKEEESK
ESVATAAAAGAPASSTQSTQSRTASTTCTGSSSSSSSRSHTDGHGQTQDA
EEEEEKEEAASRPLTAPERRALKEEEKHASAHALVARWTKHLDLFSKKMV
FIPINEALHWSLAVLCNLDQVHRLVKPPPPPPRPCPRPHAGVSAGVAGSG
LATRLRRSRKSAWGEEEEEEEGGREGGDADTLEDVAKKAEGEFKSKQKTK
LMMTKTMSTNTTTTKEGKKEGGREGGLEDEAAREFMASPSPPSQPLSQDF
GDPPTVLEREGEGGKEEEGIEKKKKKKKKRKKRRSSAELEGLDGGREGGK
REEKAMKMAGSDAEGAEEKRKALNDIFSIGPWPSAGEEERKKREKGKDEE
EEEEEGEEEEGKVHILSDDQEVDGHRVTDEKDEKEEKGGGREEEKGLGSR
PCIVFMDSLSAHRTDKIHTALLHYLRQEWKNRKAPPSDLSSSRSIPNMPY
ITKETFPIVKPRVPTQDNSCDCGVFVLKYGEMMLTDVLPTLEMWTQEGLK
TQLRDYIKHDAFSQEDVRMMREELREVFERLEGEYARGDGMGVGVDQKGG
KADRGEKKKEAEGESKQQEGGKKKGLDGGKWEEEEAEEEGREKEEEKKEG
KEEEEEEEEEGAVSSLTQVLEMRTGEEEENTLEGGREKECVKNKEEKEEK
KQKKKKEEKKEEKREEEEEMEVGKEEASKKRKETYAEKENGDEEEKGRRR
RRRTL*
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Synonyms
Publications