jgi.p|Nanoce1779_2|555012, gene_4290 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|555012
Unique Namegene_4290
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:212230..215494 -

Link to JBrowse

Properties
Property NameValue
TranscriptId555098
ProteinId555012
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:212230..215494 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555012mRNA_4290-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555012mRNA_4290Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|555012

>mRNA_4290-protein ID=mRNA_4290-protein|Name=jgi.p|Nanoce1779_2|555012|organism=Nannochloropsis oceanica|type=polypeptide|length=814bp
MFVEDRSWRFKLKIGDAVDAMDDSCGWYDSKIVELVPRVKIHFRCWESRW
DVVKEVTSELIQPLFTKAIDWRHFTLDMPLELRCKDDQKWYKATVAQIDG
INRKVLVKHLPHENEGASVWEEFESEDIACLGVHIRELSSTGAGASYSGS
SANSSRGYGGEVGGMSASLSSSGVVGLINLGNTCFMNSMLQCLSNTGILT
EFFLSGKHEGQINEGNPLGKQGVLARTYARLLKEMWDEERSGSAIYPTEF
KKVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRHKPYVVTRDYAG
EPDGQFAGECWKRHLARNDSVVIDHCQAQYKSHLTCPQCGHESITFDPYM
SLTLPLPVKSMVKVAFIFHAWPLGKSPPLSVAANLPSTATAKQLKAWIEA
FRKPSPSTINLVQIFDRRHIREFKDTDPISTLASTTISLQAFQLEHSPSL
LPPPRITSTEEGGEDEVFVMATCLFGKAKPSTFSFASASKTYERFGPMVR
FTLSSTRATNREVHARVWAATQRFLKVEEGGKEWGKEEEGDEVGKVPYRL
FVTKLGDEGVGEEVLDDGGAFDVQVLREKVLLVAFGNNVFGKRVVKMEVE
RKELHSSVRWMGGTQGEKVGAATKVIELKQCLEKFSEREQLEETDPWFCP
KCKEHVAAFKKMDVWSLPDVLILHLKRFSYVQELSSGPTRDKIEDLVKFP
VEGLDMRDVMRGPVDESAPPVYDLYAVSEHSGGLGGGHYTAVAKNFRNGK
WYSFNDSSVKPVEEGKEEAALITPRAYVLFYKRKQGSLKWAGALPPAADE
VQGEGKMLRVGRE*
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Synonyms
Publications