jgi.p|Nanoce1779_2|588572, gene_4272 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|588572
Unique Namegene_4272
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:159529..162972 +

Link to JBrowse

Properties
Property NameValue
TranscriptId588658
ProteinId588572
Product nameNucleotide-diphospho-sugar transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:159529..162972 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL022ncniL022Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02760NO09G02760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588572mRNA_4272-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588572mRNA_4272Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|588572

>mRNA_4272-protein ID=mRNA_4272-protein|Name=jgi.p|Nanoce1779_2|588572|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp
MQVIPLPAPLFFTSTHHYYNGHNGQHLVGRARRLQFYVCNAILAVFLLVC
MYLHNLRDHASDSRPFYVTQALQSAGIRGDKGMKITETEQTTTNSATEER
NSAVSSFISTIKQGKILNSSGFSTTASTAAVASVDGKSDTASTSPFDIKR
ATLTDFSVASTLVTTTLQMADDAALNALKVTSNVPPSYCITDEDIASAPK
HHIFVAAPLFNSFEFVEEFLESIESQSYPHVTVVVYDDSSDDGSADLVES
LIPNLSYEVIILRGSERRGPSYAKWVLMRAIRRLAAPMDIVLFIDGDDKF
FHDEVLDEVAATFRKKKPWFAYGRIRGYYEEQCGPPPPIVYHPHNQSSSV
RTSAWTYCHPRVFRAFLLHHFEENDFRDPASERWLLKYTDRQMVYKALEL
SGDKKVAFMDGERPHVYYRMTGNSTVYMDQKIKNKDLNYVQALIAQTEGL
PEPIHIISCAYKRVSLLKDVLKANIDLQNVDKRPIYLHVCNNGDDAQAVE
IESILKGIKGLAGYRMRTFHDNPGGFARFYMMQDAVKEFNVDYFVMLDDD
IKLPAPNGLLDLMAEARPQEYNSWWGRHFQGPMADYQSSRLTPTDLKAGK
ISGVTKFHYAGTGLSVIDADIIRFYFPLIDKVPEAYRKVEDLWLSYVVHQ
IGWRVRRIVMSGVNFMEDIKLNHDDISTELVKATALWRKLKPTKLEMLED
LRICGWNV*
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Synonyms
Publications