jgi.p|Nanoce1779_2|623181, gene_4207 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|623181
Unique Namegene_4207
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:9694..13475 +

Link to JBrowse

Properties
Property NameValue
TranscriptId623267
ProteinId623181
Product nametriosephosphate isomerase glyceraldehyde-3-phosphate dehydrogenase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:9694..13475 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004365glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0051287NAD binding
GO:0004807triose-phosphate isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006006glucose metabolic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03360NO09G03360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623181mRNA_4207-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623181mRNA_4207Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|623181

>mRNA_4207-protein ID=mRNA_4207-protein|Name=jgi.p|Nanoce1779_2|623181|organism=Nannochloropsis oceanica|type=polypeptide|length=590bp
MASAGRKFFVGGNWKCNGSVAQVDTLVNMLNESKLAKTTEVVIAPSSVHL
HKALSKVRPDIAVAAQDVWTQGGGAFTGETSAEMLKDLGAKWTLTGHSER
RFKGEGDEVVAKKAAYALNKGLGVIACIGETKDEREGGKTIEVVERQVAA
YAAHIKDWSNVVLAYEPVWAIGTGLTATPDQAQEVHAALRKWFGKNVSAS
VADNLRIIYGGSVTAKNANELAGKSDIDGFLVGGASLKPEFINIVNASDA
KASTAGPINVGINGFGRIGRLVTRAAQGKALTSIKAINDPFITPDYFKYM
FEFDTVHGPFKGSVEHDDKHLIINGHKIRVFHETDPSKIAWGDAGVDYVV
ESTGAFLSKEKAGLHLKGGAKKVVVSAPSPDAPMFVCGVNTDAYAGEAIF
SNASCTTNCLAPLAKVVHDTFGIEEGLMTTVHAVTATQKTVDGPSKKDWR
GGRGAGFNIIPSGTGAAKAVGKVIPSLNGKLTGMAFRVPTADVSVVDLTV
RLKKGASYEEIKQVIKAASEGQMKGVLGYTEQEVVSSDFISSPLSSIFDA
KAGIALGPNFVKLVSWYDNEMGYSTRVLDLLKIVHDKSA*
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Synonyms
Publications