jgi.p|Nanoce1779_2|586218, gene_4031 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|586218
Unique Namegene_4031
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:672771..679521 -

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Properties
Property NameValue
TranscriptId586304
ProteinId586218
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:672771..679521 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008559xenobiotic transmembrane transporting ATPase activity
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586218mRNA_4031-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586218mRNA_4031Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|586218

>mRNA_4031-protein ID=mRNA_4031-protein|Name=jgi.p|Nanoce1779_2|586218|organism=Nannochloropsis oceanica|type=polypeptide|length=1035bp
MLPTDDNDASHSSKADNSVQRSSISRPKSTAMDRSRDKEQGSRTSVPAAG
AAASTTMSMTRTGRLSFHDREVHIPPNPKDMKTTVTTAADTTITTAVASS
QALPGLPADLPSSPEDNPASSSTDVTINDNNNPRKSVILKSLQSMIGGGS
FRTDYTVGQLSLSNTINVSARSKMDMSIFQTKKNGSWAIRGVTLVTDNLS
YFVEKQKGSWWSRHLVANAKTTTTPTPNTGTTTTAAPSTKSGSAPTRKAL
LKHVTMTVLPGEVAFVMGPSGAGKSTLLDALAGRIKNGIMSGHMYFNGRP
RDASFYANSAYVRQDDVHIPNLTVEETLYFAARLRLGEEYTDTERRMRVN
AVSDLLGLRTCLISMVGDAGIRGISGGQLKRLSIAVEIMNMPSLIFLDEP
TSGLDSVMAHDVMTFTNRLADQNRTILATIHQPSSDTFALASKVILVTAG
RVAFCGPASEAQAYFTSPRLGFSAATYTNPADFIIAVVSGAEVSTNLVIG
AHNTDAKKLSELYESSAYFQAPLTNAPSTTDGGLTRLPQHFPTSTTDQTL
TLIRRFWIAQSRQWEFVVAQLGKNIIVASVCGAIFFGQGREISTPTFTNV
SFNVSSLWYFAMLYTVLSCLQIIPHLFFYKVLYTRERSANVYSTFAYWAA
NAIVSVPLLIVSHVVFVEISYWMVGLYPNASIHFFALFVTFLNNLISFYC
AQYIAAVSPSAEVALAMFPLVFLFLGSFAGFTIPLGELPAGWKWASYISY
PRWTYEALIINEFENRLDRAAVLAFYSFDRFDKYFSLPILCAFIVFTNVL
VYVGLSPAQSKLRFEGPTSPGDSPKKEIIVVMEDPISPLSPTTLTLEDFK
VRSAQRFPATAGLSLIFRDLQYSIGKSPERAARILKGVSGTVFPGQMCAL
MGGSGAGKSTLLDLLAYRKTGGYITGEYLIGGRTEKPASKWCSYVTQDSV
HISLFTVQETLEYAALLRLDEKTSLQKRKERAVDVMKMLGLEDVADVLVG
SSLLKGISGGQARRLSIGVEIMQLPDGRCIFDRF*
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Synonyms
Publications