jgi.p|Nanoce1779_2|586128, gene_4009 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|586128
Unique Namegene_4009
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:619076..625335 +

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Properties
Property NameValue
TranscriptId586214
ProteinId586128
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:619076..625335 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02050NO10G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586128mRNA_4009-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586128mRNA_4009Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|586128

>mRNA_4009-protein ID=mRNA_4009-protein|Name=jgi.p|Nanoce1779_2|586128|organism=Nannochloropsis oceanica|type=polypeptide|length=1955bp
MQYDGHYYDDDEAGESLHVMEDLQDLPLPEALAIAPDLLGHEETRLPAAF
ALLDRLKLPAPGDDMAEGAPKLLRLLGRFLGYHPAVLEQVLEALSLGECS
GPIIESLPLLVVGAGPEEVAQVVEALKQALQEDLAGLLLPVLGALFDLPL
GPRLRREALGLAQEALAVVQDADVPVVVRTLLRTLDEHSDPAILAHIRAE
CAGLSAQSTAVLMEVLATALSTNPMVARMLLLSIRSSAGTITMEGQQQQQ
LSIVDALVLVLLFSHPAHQPVVQDALLRFLATSPLSFSTTEGAGTSKGSK
SSNSSQSIASLLCRLVDFTSDAHWQSLAAPLSELSQWLLLSTLLPPRPRL
AQALEPGQQAQALAAHLLRRLFQIHVGLRDEILGFLMTLCVSCGRGTTAL
EDEEEEQQQTSRTAVLLPLMKASLSILARLAQESPRVLVPYAGMMCDQIL
NSASVLPAPVMGPLLRALTLLARSHAASGIEITLIIYIQKQLWTNFTSGG
DARARSSRSSSSGSRKRMRGGRVSWAVDDMGSDDGRKLTSLVLAEALVFL
DKEPKTKQCEGEDEDADADKDDLSGILTWVVRAVPMATPKVAASGLRFLL
RVLARQQQQQQRQRIDENRMTRSVTAIERELRPQVEEVTAGLASRLGLVV
RSEALMEKDKTRLSYLPLERQIEDVAPVILPWRAPQAPATQCRPPLLPTS
KGVLGILLQSYDREGGVTLAKGNSTTHPSLSSPLVWQVEGMVEAFVPRMV
ASDSVGLGPLFLVKTVVTALLDLQLKALTTAEVKAACFEQLALAPLLLPS
WPRAMGRARARQPEGEGPSIWLQSSGQEQGWEEDARLWREGAVTRNKGRQ
GSKGIGRKCNDLCSSKKSRSRRGKLEGEDDLERLSDGEDEKSDEDDEEEE
EEEEEEDDEQDVFRDRCGPKYRWLRAGWGALFAMMVTGPVIEAWTVARKR
REGWAAQVPASTLHALLRRHMDLLHRVRRSLERVSLTASAAARHVGGGGG
AAGVAIASEPVRVTRSRRRLERALQAYGSTAVGSMRMQEMLLAVLLDWTG
EVLGKRSRESSEEAKEEEEEEEEEKEEGEERLAPLLGLVRCLLETMLCRD
EQAVALEGQMPLDEEGGIEEGQDGPQQPLWVDDIKLKNVGRMMDQVGRLN
RLLRILRRRRFSSALEARDVSRALCLYMAYTRRLCLRAAKQEGSGILIPC
DLVQSTERERGGRGNKAGSVMGFGAGASSSSTEAQEQQQQHRLASLGDVA
RLFMPSKYEVNEESGPGFHEAREYAFGFLAREIEQADDEGVACGLLELLS
CMTVGTQKAGSAACFKALHCLETAHPVVDPDMTRVFMCSGIGMAGGGGRG
GDSSSAQDSLPVALLPILRPALGLHEVQTRVLLDLRKAALSPSLPLAQRP
VLRHFVLTFWSLLPREGRAGGLVRLCEGLQAVFREETEAATEALPGGGNG
RARRGRLLQRQHHEGARLYVSSSSMNVPPHEAEHGIRVLRALTPDGAPAL
LELLLLLSLTTLLLARPQSNARTAAAVTRNSHDERDSLLLGGPYEEVQAA
LVALCHLMRLIGSGTAGMTARSGRGSARVAAATVKTACLALGGLQWQVER
CLAWRTARGGPRETQTPAEEVQERTRDHETDLVHVQRLVEDALAFVGLVA
DMSEAIKKQQQQNKGGNGGGSSSKTKGKLHSYSFTFHAINQKSAEERWMG
VAANLFDRHFVPRCVLACERLVEALRDTSSLLRLPIKIQASAFSFSTQLF
WKGKADRKKGQGEEGGELWQRRLVRKESRSALLMAFMAAERKSEGNHLRV
GIVGGRGKQKEKDEGEGEGWEEMSDDEERSIDLGEEEEDEDEDEDEDEEQ
FYALMSDGGSLRHGQGVSNSTQRCESQGDGRKEEEHEQEVDEDEDDDCGP
RRRRRSGTCSPLRTPKVVVGGGTNATVTGSDDGTLVVQFRSNRGYSEGKR
RRRS*
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Synonyms
Publications