jgi.p|Nanoce1779_2|421236, gene_4000 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|421236
Unique Namegene_4000
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:601054..604617 -

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Properties
Property NameValue
TranscriptId421322
ProteinId421236
Product nameT-complex protein 11-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:601054..604617 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02130NO10G02130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|421236mRNA_4000-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|421236mRNA_4000Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|421236

>mRNA_4000-protein ID=mRNA_4000-protein|Name=jgi.p|Nanoce1779_2|421236|organism=Nannochloropsis oceanica|type=polypeptide|length=930bp
MLLPPAALEQDQRLAAIVLQAWWRRFQAAYKAAAAMRRQRPQLLQAAQVL
ALQSSKGFEDVLTKIQSKELIRSIVGLLAAVSGPGFSAPPMVSRGARGSP
RSLEAAQQHQARKFLTAIMIKHHPEEVIVSSYAEDGNNSSVSLGDFEARL
LCVAANLALMSAVGLIQAIECLKEGQQQRQAGALGTFRLRLNTFNFSRAF
MNASLRVLQARQARGMAASFLSSYGEAYACLRDAERSQEDVLIAAARQSV
EKVRVGIAKVLGRDTTEKHCRRVEEALESMEPFVVLMPGEIKVILPHVRV
RMPHPPSSSSAASPTTGKIDGKAEVRLNNKRSGPSTPCSIVGQEEAGTDQ
LPKVPQSLAALLRNEHLAHEIILNPDFKLEEKKQPLGTSSLSALAKGELA
VELGRVREAMEKMFWDRLVMAMTPAEQEGPEDFVPGVVAQLRFGGPQGSL
FEARVEAVNKEDGTLDVIYLMDGVKERRPLEDFRLKSDPLNYEPLLALLE
DACEKLIELTPHRKDLAAELQAHVDTQLLGQMACQGLLDAVTIHGLVASI
LERLLALQAPVRAAETRAWFAEVEVQAQAAMNEGKDGQGGSTKPTPAFVA
LLPGVFQTIFERIDETRRDIANAHMQMLRPFLIEHGVVYERQKFAERLQE
GEVKLIHTQAWLRDVLASTERVAQLPLIAEGNTQAHRYLLADALMCLLRK
PVRLDNPMKAKLPETLFHDGRRMAEFRDELDRLSLVAVYSSLLRQFLVTP
SPDLPVCRYSTVRKFLLALETRLYTILQDDGEVTLPHLVEEVMQSAHHIH
ADAGTAISNEQAATLRGMLQNAGSLENPLYNLLFARLADVLNLHARGDAA
GASELVRRFGFQTFSVQLAATGNGLRRVLEHNLAVHGELYSRLFRAEASA
LLHDAAEDAANQEGDGIARSNSSSMQVSP*
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Synonyms
Publications