jgi.p|Nanoce1779_2|638563, gene_3998 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|638563
Unique Namegene_3998
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:590781..595662 -

Link to JBrowse

Properties
Property NameValue
TranscriptId638649
ProteinId638563
Product nameADC synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:590781..595662 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000162tryptophan biosynthetic process
GO:0009058biosynthetic process
GO:0000160phosphorelay signal transduction system
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0004049anthranilate synthase activity
GO:0016833oxo-acid-lyase activity
GO:0000156phosphorelay response regulator activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02150NO10G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638563mRNA_3998-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638563mRNA_3998Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|638563

>mRNA_3998-protein ID=mRNA_3998-protein|Name=jgi.p|Nanoce1779_2|638563|organism=Nannochloropsis oceanica|type=polypeptide|length=1378bp
MKIKTLSRSEEAFTRECKGDVVKVFRNLEPALHPFDKAREYTRALTATKL
DKMFAKPLVGACVVVGWGSGYYMTLWKRYGNACMRGARVPQIGCKIKGHA
TANGALRQGRCPVRSVSIKAYDNDKIAAYNFPSPNLHSLFFLGALDGHTD
GVYCSALSKRNLVQFLTGACDGEVRVWDMNVRKCVWRAYAHSGFVRGLSV
APDGGTFFSCGDKTVKQWKLCVVGDTSEEPSAMNTWLHTESLTSIDHHWR
DTRFATAADSRVLVWDHARSSPIQSFSWGCDAISCVRYNPAEHSLLASTG
SDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTF
DMRKLVQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIFNHREGRS
REVYHTKRMQRIFCVNFSGDGRFVLTGSDDTNLRIWKAQASKALGAKVSR
AEKKLEYTEALKKRYQHMPEVRRIAKHRHVPKAIKKAQELVRVQQDSQRR
KSQNRRKHAKPDSDEFKFVPERKQRVVAEMASSGLTTYTFADGTVKHRYP
SSLAQAFAGFHHYRDRRRVGSSGGGGRRGLGMLKMMNMMEVEEGRLSLGA
PRYRPLSGRFITNGGVQVTCQVEDVMDTTKEVDALLEGLDSHEGVLLASS
YEFPGRYARWTIGFIDPPLKIDSRTLDFTVTALNARGEVLLEVVRDALLH
PESPLPLAGLERGKLSEEEGGGTVLRGKVPKSEEYFPEEERSRQPSIFSV
IRAVVDMFHSEGDPQFGLYGAFGYDLTFQFESIELQMPRPDNQRDVVLYI
PDRVLVVDQDKRAAWRVEYDFSWKGQSTQGLPRTGRVREYQPLPAGSLKR
NRDSVVGEYARRVEEAKGQFKVGNLFEVVLSQTFFKECPLKPSEVFARLR
TTNPSPYGFLINLGGNEYLIGASPEMFVRCERTKEGLRVETCPISGTIAR
GSDALEDAARIKAILTNKKEESELTMCTDVDRNDKSRICEPGSVRVLGRR
QIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIQFI
EEQEASPRAWYGGAVGLVAFDGSLNTGLTLRTIRVLDGVAEVRAGATLLY
DSDPPAEEAETELKASALVDALEYRGPGTGDDEGGEEVMPPLVPLARRVL
LVDHEDSFVHTLANYLRQTGAEVSTVRSGVNALRLIEETRPDLVVLSPGP
GCPKDFQLSQTISAALAARVPVFGVCLGLQGMVEHFGGKLDVLAYPMHGK
PSHVDLTALSEATDGSSSSSSSSSSAGCSTSSTDSIKLGHKYKIFEGIPQ
RFEVARYHSLHGNQATFPKELRVTAMSEDGVIMGIEHRDLPLAAVQFHPE
SILTNPTHGLRMLANALKYLQFEEDKK*
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Synonyms
Publications