jgi.p|Nanoce1779_2|586057, gene_3993 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|586057
Unique Namegene_3993
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:576568..579204 -

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Properties
Property NameValue
TranscriptId586143
ProteinId586057
Product nameprotein kinase shaggy-like
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:576568..579204 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050321tau-protein kinase activity
GO:0004674protein serine/threonine kinase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02220NO10G02220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586057mRNA_3993-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586057mRNA_3993Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|586057

>mRNA_3993-protein ID=mRNA_3993-protein|Name=jgi.p|Nanoce1779_2|586057|organism=Nannochloropsis oceanica|type=polypeptide|length=493bp
MQVGDPKNVMGGQDDAKISTSSGSSSSSSSSSSRLHGSSGVGGSQPPANS
SVGNNASSLSSTTTSSSTSGGSAATGGGGGGGGEEQTISYSAERIIGHGS
FGVVFQATELETREVVAIKKVLQDKRFKNRELQIMKQLVKLPHPNIVLLK
QCFYSNGEKPEELYLNLVLEYIPETVYSVARQHQKAKQPVPLLHVKLYVY
QLARALAHIHGLGICHRDIKPQNLLLDPATHVLKLCDFGSAKFLVKGEPN
VSYICSRYYRAPELIFGSTSYTTSIDIWSEGCVAAELLLGHPLFPGDSGV
DQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWNKVFRSRLPQEA
IDVVARMLAYAPDRRIRPIESCAHAFFDELRDPATRLADARGLPPLFDFT
DTELRTGPPGLVELLVPSHARMVEVPRGRKNGDALPGAAAAGGAAGGAGA
GAALATARGGGGEGGGGGAVGGGRHGHAVQSPVVGATGGGAT*
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Synonyms
Publications