jgi.p|Nanoce1779_2|420574, gene_3985 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|420574
Unique Namegene_3985
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:553957..559654 +

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Properties
Property NameValue
TranscriptId420660
ProteinId420574
Product nameglutamate synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:553957..559654 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016041glutamate synthase (ferredoxin) activity
GO:0015930glutamate synthase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006537glutamate biosynthetic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02290NO10G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|420574mRNA_3985-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|420574mRNA_3985Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|420574

>mRNA_3985-protein ID=mRNA_3985-protein|Name=jgi.p|Nanoce1779_2|420574|organism=Nannochloropsis oceanica|type=polypeptide|length=1645bp
MAGRQHYTVLLTLMVLAASQIQAFRPAGFLPVGRSKVAASRVVAGVDRFQ
GYLAGPFRSITGITISTANGDRSSRRRRMLTQAWAMSSDCGPDRSNWGPA
HLVEERDACGVGFIADIAGKAAPGVVLDKALVALGCMEHRGACSADQDSG
DGAGVMTAVPWKLLGVSAAEQEHTGVGMAFLPQDPERAQDAMRVVEASAA
KKGFEFAGWREVPVKKEKLGQLARDAMPSIYQFFLRAPGITGDALERALY
LFRRSLVVCFQEAGQVEVGQDTYLCSLSSRTIVYKGMVRSVILREFYSDL
ADGDYETSWAIYHRRFSTNTMPRWPLAQPMRMLGHNGEINTLLGNINWAR
AHSSDLSQQCDFEKLVRPDNLSLLSKCDTQAAKDLEPVVDMSKSDSANLD
GALELLVRAGRDATEGLMILVPEAYTSLPDLESRPALKAFYEYHGGIQEA
WDGPALLVFSDGKMMGAKLDRNGLRPARYFVTEDGLVCMMSETGAVPIEE
GRVKEKGRLGPGDMIAVDLEKGLFLHNEDIEADVTTRKPYGEWLARQSLT
ISPQSFAQEAVMDQVTDLPVQLTKFGWGLEDTEMIIADMASTGKESTYCM
GDDIPLAVLSSKPHTLYNYFKQRFAQVTNPPIDPLREGTVMSLKVSLGRK
GNILEPKEEKARLLRLESPLLNSAELDLVMGAANFSSRPLSTVYPLSDGP
QGLQAAVERLCKEAAKAVREGAEILLLSDRLGSDLEGEMTYIPPLLAVGA
VHHRLIEEGFRMRASLVVETGQVWNTHQFACLIGYGASAIHPYLALQAVR
DWHGEKRTQVQMESGVLPKISREKALENYREANEAGLLKVMSKMGISLLE
SYMGAQIFEAIGIGSDLLQLGFRGTPSRVGGLSVADLAQEVSGFVGKALE
MQGEEKSRKLENYGFYRYMVKGEYHHNSPQLSKLLHKAVDGDGDVSQYEL
FSRAVAERPPTTLRDLLDIKTDRTPVPLAEVEPAEAIMRRFCTGGMSLGA
LSREAHETLAIAMNRIGGKSNSGEGGEDPIRFKPLVDVDEKTGISAVLPH
LNGLRNGDIATSAIKQVASGRFGVTPEYLMNARQVEIKMAQGAKPGEGGQ
LPGKKIDEYIAGLRSSKPGVTLISPPPHHDIYSIEDLAQLIYDLHAINPQ
APVSVKLVAEVGIGTIAAGVSKANADVIQISGHDGGTGASPLSSIKHAGS
PWELGLAEVHRTLLENGLRGRVLLRVDGGFKTGYDILQAALMGGEEYGFG
TIAMVAAGCIMARICHTNNCPVGVATQREDLRAKFPGTPSDVVNYFAMVA
EEVRGLLAEFGYRSLDEVIGRADLLKTREGIQLTKTKSLDLEFLTALPDT
RTERGWLKHEAVHSNGGMLDDDILQSVAGTIAQQGMQQETIDIVNTDRAV
GARVSGEIAKRFGNRGFKGELDLRFRGSAGQSFGAFTVKGMNVLLEGEAN
DYVGKAMNGGRIVIAPHPDFRQRGDVSFPEQVIVGNTCLYGATGGVLYAL
GRAGERFAVRNSGAVAVIEGAGDHMCEYMTSGVVVSLGRVGKNVGAGMTG
GLAYVFEDDAMAASSLPFSKLVNKEIVKTQRIQSKAGEAHLKSILIDYLE
ATGSAKAKQILENWSVSVGKFHQVVPPAEANVPEVKEASVKASA*
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Synonyms
Publications