jgi.p|Nanoce1779_2|629628, gene_3926 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629628
Unique Namegene_3926
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:418646..422046 -

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Properties
Property NameValue
TranscriptId629714
ProteinId629628
Product nameBeta-lactamase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:418646..422046 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02800NO10G02800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629628mRNA_3926-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629628mRNA_3926Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629628

>mRNA_3926-protein ID=mRNA_3926-protein|Name=jgi.p|Nanoce1779_2|629628|organism=Nannochloropsis oceanica|type=polypeptide|length=925bp
MPPRTPKVATKKKEEDGGAPAMEEVEEIAPADTQAAMEADDDDGDVKGEV
MPTTAIAAGPASPAAPPPAMDIDPSRDGGSPHPASQDSIQSSYTSLKAQA
SLPFPPPPPPPTVTGEGLTFRILYGAQDNEPLCYLLKVGEATILLDCGWD
VQLDESMLESLLPVLAQVQLVLLSFPDLAHLGALPWVAKHLGPGVPIYST
QPVFKMGQMVLYDLYLSKCMDTASGAAGCPAFTLDDVDAAMTRFQLLKFS
QPLEVRQQGRFYLSVTPYPAGRVLGGCFWRVNYKKVEEILYAVDFSLKSE
RHLTGAVEAFNALSSDKEQRPSLVIVDARPAQGMPLDERKVEAEFLDTVT
ATLRKGGNVLIPVETSGRVQELLLTLNGHWRTDRLLSGYKIVLLHHMARN
VLHFTKSMVEWMHPEVIRAFDRSLRNPFTLKHVVPAQSMLELEAAMGEYR
NPVVVLASDEGMDTGFSRALATRWASGAENALLLCGHLRKGSLAESFWKL
RHLPKASLSFCVPTIERIVGEELAGLKEKEERERRRALEVEEFRRQAHEL
MEGTVGAAMDEEQESVSLPSSSLSSLRKVGASTAKRRRKTAAMYRRPRYL
VFGCRDAATVEVDAYGEPLAEGECVDLAKAMAQETRGMLQGLALQGPSAG
GGGVQRWGYLDDVLMTEGEAQVKAGTNALKFLMKESMVEVRWKVKAFSME
GRTDGKNLRAILQNLAPRRVIFVHGTQESFGELSRYVGKMLGGSTKLQFD
SKVLDVGLEEEGTGERAWGAGEEEDEKVPPLVLKEMGHYRLALVRAVASE
TSMDADGKPLVRCQPARVLREGGGKIGVEGEGEEMINMPRTRAPFLLADG
DVLLTETSQRQSLRQKLREAGVNPEFQVGPEGASLICDGTTVVRVKDNRV
TLEGPLSETYFRVREAIYSRFVAL*
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Synonyms
Publications