jgi.p|Nanoce1779_2|629621, gene_3915 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629621
Unique Namegene_3915
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:389964..397997 -

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Properties
Property NameValue
TranscriptId629707
ProteinId629621
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:389964..397997 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02890NO10G02890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629621mRNA_3915-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629621mRNA_3915Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629621

>mRNA_3915-protein ID=mRNA_3915-protein|Name=jgi.p|Nanoce1779_2|629621|organism=Nannochloropsis oceanica|type=polypeptide|length=2002bp
MDIPPDKGREVMPPPVQENPKALALLRGMCAPQRSMLLDEIHVQLLRVLA
RGYKGMGGMNKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWG
DDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLM
DLPEVGAVLGRRGLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACP
AVYHYGCVGEKLQGLPATWLCPECRFPDPAYFAARVPEHYCRVVRKRGKG
DGERGGEDEEEGWSLRVVHGFVFKQVMTGSRIGVQRGPPQLLNPGQVFLL
LKQLGPERASRWPFSQIRRPPNLFPNLSSFSSEEGKTMRDGGKEEVEKEE
VKVEINRVSLQRSVIGLQVQVERHPLVPKYIMPSTLDVSLEEEEGGPDVS
LEEEEGGPAFPRSLLSFPRKKAVTQRKHNQKKKKEQNKLKQQQQQQEEEE
KPKRPRGRPRKHPLIVLSSPPKSSSSSSSSALEAKGGGEKEEGGIAEDGM
VAGEKVKHQQRANMNKVGNSLTASNRLPSGRQRNQRAKLRDEGKDKGQEG
EKEWNGGSEEDNGKVATGFVEDNAKGKEKGLDVDEDNEDASVPAEEEEKE
EKKENVKVSSPEAEEQHLLPVPLLLEEKNEGQAQEAGNILEVEDGGEGMM
EVAAEVPFTKAEEEEMKIRATAIRTGGNGDCRSPLSSIFPHSAAAVSVEV
VGGEAGEVGKAIKEGESLLEKGMEEMALTYAPEEGGEGGKEEGEGAVNGD
STESVLLDGKEEQPVKRKRGRPPKKNKDGIKRGPGRPRKVVGAPDDAKGG
EKEGGARGVKKKEETTTTRSSRQVRKPKLFADIEEHEGRAAAEKALLKVT
RTRKAKKEECDGNEAEGGESMGGGKREGKRGRKKKLVKKVWARSDSEWEG
EKKSTVRRRGRGRKKFVHTKKPVVKRGMPRSNGVSDKKMGERGAQTKGKG
KCRSSGGAGGRRRRVSLASMSSDEEEDSAMEGESEPEEEDGEGGEEDDDY
GSLFGGEEEEEEDDSYFNLAGGASDDDSDDDDNFWLLRGSRRPHRTMSAG
RKQQLDSVEEEERERWVEEGVLELADDPDDCLANTQPDIHRYRVLARAEA
ETDAAAFNPFLYTNKYKFSEAPDAPKLALNLFKGTWRPRFAFPIRPVMNV
DDREVSKCLSLAIQPLPQVAHLKRLEDRAASLHLETLKDMLLQLESELRG
LLYGPWVSGSAVINGWCERVYCSMSVRELGRMTSLLIEFAHPRAFWQHWH
ATRAGGFNIRKPTELGRAPLREPAGLLVGESKRMPRLVEGGTEGGKGGTE
VVRGMPVRERKRLEDEARRRGVDLGGAEDWKALKGMREVEELRETGKEDL
REPVAAALVSDKKKTGGMEDNIDAGESQILSPDERRPMMAHKTDENEDEA
MEEDRIEEKGEKVAKETEMVDSDEDSADRKKMFRVHLSSTPHSPSFATVD
SPQGPSKKRARPRTARGEVVDEEEKEEEDAEEVDKISSEGHGAKRRLSAI
RAVTNMRDVVRKADEEEEDEDEKEENEVEKEKQSKEGGIKDQEELRGAVV
DGRGLIVMYDVAELSEPLDALSAWGGRVFELGLDDATGEVELQSCRHVKV
GGEVVERMRIRTMRGGRRCHRWEERAALPRYIVRRMARRTPFRNASFAPP
LGVSYPSKGAQGTQLPRVAMSHLLAYRVQHARTSAELGQLLRVLDHCLDH
ERMKEAASLSSSSSFKVALSGVIRKCRPVEAAEVTGEEKGDGEGEAVMRG
EIGVPMEYLYYHYRRRLLEEGAGGREGSHQQRQQQRQLMLGSGEWVHEDS
LDLRLLQAYRRSVVDEANATKARAFLRRKSKAEKKLHKLMGAFQRRTHEY
WKEVKEEFWALQGTEGRLEEVSTDVSSTKAEAGAPGSSWTSESNVEEAAK
SDAGQILYTKARAGWLAMYEDYSSNSLAQQKKIWRLERRPEWEIEVKGRT
YREVNPEPQVLHDWKELCVKVEVGAEEKKGDEVTRSVGDEVEEGQVAAME
E*
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Synonyms
Publications