jgi.p|Nanoce1779_2|585470, gene_3823 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|585470
Unique Namegene_3823
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:119422..122755 -

Link to JBrowse

Properties
Property NameValue
TranscriptId585556
ProteinId585470
Product name2OG-Fe(II) oxygenase superfamily-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:119422..122755 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03840NO10G03840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585470mRNA_3823-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585470mRNA_3823Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|585470

>mRNA_3823-protein ID=mRNA_3823-protein|Name=jgi.p|Nanoce1779_2|585470|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp
MKEEKRIAASMGKEEQEHRWAALKERLGSEATRKALEEEGVVILDTAFGA
AWAEELRSDIIFLVERGEMKPNQTQFGPKEVYRKPFIWEADLHDPLLRAR
VPALGALLENETLTEGLHLALPPSLGGLQRGMGGRALKVQRNGGGGGSFA
CHYDNPGKPSKRRLTCLVYLNPQWQEGDGGELVLQPFLDESPQVIAPLMD
RMVIFRSDALLHRVLPAFRERYYCLTLWLDGTEGVNSDQDLQLRFSPAEA
ADPLLLARKLRLSPSQRVLSRAVYAEEYEESLKDCMAGGTPGARQMLAAH
AAHLEAVKRNPSLAALVEKMREVKVSRGAKQGGKEGGKEGGGM*
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Synonyms
Publications