jgi.p|Nanoce1779_2|228685, gene_37 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|228685
Unique Namegene_37
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:108013..110320 +

Link to JBrowse

Properties
Property NameValue
TranscriptId228771
ProteinId228685
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:108013..110320 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004147dihydrolipoamide branched chain acyltransferase activity
GO:0008080N-acetyltransferase activity
GO:0008374O-acyltransferase activity
GO:0008951palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity
GO:0016406carnitine O-acyltransferase activity
GO:0016407acetyltransferase activity
GO:0016408C-acyltransferase activity
GO:0016409palmitoyltransferase activity
GO:0016410N-acyltransferase activity
GO:0016411acylglycerol O-acyltransferase activity
GO:0016412serine O-acyltransferase activity
GO:0016413O-acetyltransferase activity
GO:0016414O-octanoyltransferase activity
GO:0016415octanoyltransferase activity
GO:0016416O-palmitoyltransferase activity
GO:0016417S-acyltransferase activity
GO:0016418S-acetyltransferase activity
GO:0016419S-malonyltransferase activity
GO:0016420malonyltransferase activity
GO:0016454C-palmitoyltransferase activity
GO:0016748succinyltransferase activity
GO:0016749N-succinyltransferase activity
GO:0016750O-succinyltransferase activity
GO:0016751S-succinyltransferase activity
GO:0016752sinapoyltransferase activity
GO:0016753O-sinapoyltransferase activity
GO:0018030peptidyl-lysine N6-myristoyltransferase activity
GO:0018031peptidyl-lysine N6-palmitoyltransferase activity
GO:0018711benzoyl acetate-CoA thiolase activity
GO:00187123-hydroxybutyryl-CoA thiolase activity
GO:00187133-ketopimelyl-CoA thiolase activity
GO:0019105N-palmitoyltransferase activity
GO:0019107myristoyltransferase activity
GO:0019186acyl-CoA N-acyltransferase activity
GO:0019705protein-cysteine S-myristoyltransferase activity
GO:0019706protein-cysteine S-palmitoyltransferase activity
GO:0019707protein-cysteine S-acyltransferase activity
GO:0032216glucosaminyl-phosphotidylinositol O-acyltransferase activity
GO:0043741L-2-aminoadipate N-acetyltransferase activity
GO:0043764UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity
GO:0043806keto acid formate lyase activity
GO:0043849Ras palmitoyltransferase activity
GO:0046941azetidine-2-carboxylic acid acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G00600NO01G00600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|228685mRNA_37-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|228685mRNA_37Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|228685

>mRNA_37-protein ID=mRNA_37-protein|Name=jgi.p|Nanoce1779_2|228685|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MEDTGRTYHVKVSAVVSKVSVCVCDIHCTQTRGRELTKQSRWRVTDIDKT
STTRAWTPPIPPASLGCPLLCGSSRPPSFLFVIMQSPTYWLAPRRFSTLQ
PPTKSQDGLRFDTSNQRRILLPGCRSCCRLPLPWAPLKSRMGTPTTPSTP
QRNGERLETRPLDTSSDKVNGGAGGSKTREVSASISADLLGYFLAVLILL
NFWSAAFLELVMYVVFAPMYPPIWHATRILGVRFGWLPPMIFLKWANIRL
RVTGHAAAASGLGTMPSSSSSSWSSSWQRYIDLFTPGKLPRALIMINHLS
WADSFVLSPWLHAHNSVNGDTCWPMWRGFINMPLGWIAYMSECPVLGYGK
EMDLETIRKSVSRFFQRRMTKFFLFPEGAVFRECMLQKSHEYAQANNLPL
LDHCLLPKHGAFLEAGQALHRQGMETLVDITIAYPPTSSLYNAPFNVIDL
VKYHPTPLYVHLNVRTFDMREIPWEEEDKVRQWLTRRFEEKDRFLDDYYK
GKGGVMVEGGKEEGPRWRDLALDVLLWMGVQVVMYTVNV*
back to top
Synonyms
Publications