jgi.p|Nanoce1779_2|370824, gene_3699 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|370824
Unique Namegene_3699
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:1009308..1017928 -

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Properties
Property NameValue
TranscriptId370910
ProteinId370824
Product nameE3 ubiquitin-protein ligase UBR4-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:1009308..1017928 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03670NO08G03670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|370824mRNA_3699-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|370824mRNA_3699Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|370824

>mRNA_3699-protein ID=mRNA_3699-protein|Name=jgi.p|Nanoce1779_2|370824|organism=Nannochloropsis oceanica|type=polypeptide|length=2670bp
MMEEEMLVVGEEEEEDEEEDEEEEHRYSSDEEDEDEEVRMRGDRGGGPAA
RAGITGSTEDSDRDNDEFLVEEGALVPSKNARAHVLTHSPLTTALLVEQG
RIHSWVLIDLACRSLKSSNDRARGIAAVLVYRFWEGLVVEDRRKAIKAFT
RFLPAFLAHGADAVGMLQVLYGLIENEGKDEKRWESRQEKALGGEEEEGK
TKLRQQKQLPEETEEKEGQLLPSSFSTSFVFFNLLVRLLDSQLHGLINHP
SSPLYAALESNHPILASLPRYLEPTPCLPCTRLRSSFSSSSSSSPPSSSG
SPPSSSAIKYRLSPLDGLKCLQRATENSLFLSLRAPYRICRVQLTISDAH
ARHVKTIRLLFLPRPLLSIAALSSTDPHKWEELTTLHLRKGQSFLQVDLP
LPALVGSLWIEYNDFYPPSPPSFITTAGAGEIAGAVPCPNCGRELDAHRF
CRSCGEIAGCRSCRHVNYSQVDSFLCVACGYCGYGSFRYRLLAVPAGLVL
GGRGRGGEGVKEEEVMEVREAYEKTAGLLMEEQRVQHVHVGEIQRLMDVN
RRGGEIVGGTDKGGRDGKSERIRGLLVDSAQATMGGRGLERAVPAEVAAA
AAAAAAAAVEGWGSKSCSSRSSRNTSSGREVTFAIPPQSAPDSHPASSTS
LPSPLPSSSFTGQPPHQNLLYASFPVISTPPSIAVATAATTSAGSVAPSA
VISYYTGTVRASYEKRLSYTRQLKRLANELEEHQTRMEEGAWEEDEEEDE
DEGVRGHGAEEESACLDCRISTIFCLLCLIARMVENQSEKGLLRLLGLHR
QDFIQPQQKQEETSRLLSLLMAVFEPITTYQTAAIRLHAIELLKLLCSVG
GALVQSHLHNLFFHHALPRLIPLTLRNPEILTPYLDLIHALCHFSHTDGR
TVPSIPPSFFLAMNVRSFMLPLKLLRRVGPLAFDHRMVAEGVALPCLRLL
SALFLGGRRKEEEMEGVVTKFAFQLLVEMIEGKEGKGGKDGGEKEVEERG
EQEREMVLARRVLAKWKATTTSSSSSSSSGNIDTNATFFSSSPHGSWWLS
LLLTPHSLETRKQAGWLMAGLLEKVDRFHAQHQHQQQQQEQRQQQEQQQQ
QQQQQQQQQGQKTEEMDEDMKEGEKDDDKDEEGEEEGEEEKESAKGEAMD
VDTPPSATSSLPTFLPPPFSLQTRLLDLLISVLNNDEQQQPLSEPSFLQL
FALLRHLVCHPILASYLTACGGLISLLQRAKKEADRLLLLTRRSSLSICS
STDTNHGLVLFQLIQALKALLAFHPHLRQQRLQQHLAPLLRLVLQLSSFT
VAPPAVDASLLDLMGLIAPGGGIERGREGGRKGNEEALYVAALTKILAEE
VEGNKKSTPATRPPSRLFSPRTLYHTSDNLLFLMHAMQDTLSPPIPLPSF
RIQLRRAPSQDEFFRGNLSRNPIGVWEITLDVENGEGREGGMDQPTVRDL
RRWLARELGMVDSMELLECLVCGKIVCLDLPLRLLFGGMWREWVMEKSPE
IYGFPGGEEGGREGGNVPNDANFPPMVVTYRLMGVDGEPTEEVVESLEEE
EAAGEEKEAAAAATRELTRVLGATRGGLAALLDLARPPSLSPSPLPLTPS
SNEWEIPCVATKVLKLCCKSSENRARLLFNLEGPATLLSYLLAALRSSHQ
ERGGGGEKKEKGCGGTAVLLQLVEELGSGEGEGGKEEGGDGDDEEGQAIP
SSTAMVEEGGAKGQREGRKGDTVRGFLDALSDPTLIEVLQASPSLTKAVG
RLLPFLTYGRQEACAALAEKIVEEINWSRWEGEKEEGSIVTAAAEATFPP
LRLTIMLEALAGLPAGRRDAVSASTFLRDQLLTRGLAAATVAALQAALPV
GEGIGKAVKESGTRGEFLKRKEKVEAAWKVGLSRPLVLPALRVLAGLGRG
GHGGTWALMMKEGALGMLHDIEGLTGSGDAGSVAEEILEDALNAAAVAAA
ATASGGGAAAAAAPPGTVNGAIGTASGTAAMATAASVLMEVGETIRGLRQ
TTKSQKRRLAQQNRTRALSAMGLTVAPPPFSHPPSPSVPTPAVTTATATG
TAASASLSQQQQPRKEEESIVSMEIDASGGSAASACASGSPSSFPSSSSA
SSFSPSPSTAPRALSSNETSRLRRPRSLSLSALPSSSSFLSCYSSTAARG
AAAAAAAVATSSFSSSSSKWLKDLQGLEEEAGVACEVCQEGMGLKPTEVL
ALYIYSKAVANCDVAAMEGDALSMGGNEVGEEEGGGGGSGGNNPVVAALT
EAAAPTAADVAAATVAEPYSSLLRARSFFGQLGGTGGGAGREGGGAEGRG
QGCRQRHFTASASSASSASSSAFSSISSAFSVSSAGLSAARRSCRLITTV
TAHNFIHLSCHAEAVRADRALKRPKGEWDGAALRNSRVSTNGLLPIRGPQ
TNRELFNQAVEKHFSRLSSMHGQTLLSRFGLIAHDVRLLLLRLAYGESVR
DDCGGGSLGSNLKLIPYQLALGMHLKEGGFGKKEGRDVARLEGMMRAWIR
RVERVLREKEEAHEEEEEEVEEERVEGENGGGITPSEATVVKSGSAPEGG
KKEEGGVQQQQKQQQISMTAGRKRRRVEGRSRQVADILELTEGATFMPVL
ALFFLSRGEWESARPVFTKMLMLLAGVKKAKGDGTGSGASSSRGVLGGGE
EEEEEEGDKGCGHSRLQRQ*
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Synonyms
Publications