jgi.p|Nanoce1779_2|669598, gene_3670 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669598
Unique Namegene_3670
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:918296..922758 +

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Properties
Property NameValue
TranscriptId669684
ProteinId669598
Product nameAutophagy-related protein 11-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:918296..922758 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03390NO08G03390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669598mRNA_3670-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669598mRNA_3670Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669598

>mRNA_3670-protein ID=mRNA_3670-protein|Name=jgi.p|Nanoce1779_2|669598|organism=Nannochloropsis oceanica|type=polypeptide|length=1032bp
MPAQTRLLQNISDRHPHSCLNSKQAFPAPPQEAMPRVVLPVKVAETGAVI
NVELQNPYQDDSVDELKGMLASATHVAIEDQILLIGPPYKPLKRLDPPLV
FSSSSATDEEAAQAEQQQQQQHLSYSTSTLADSSSSSITASLSSSSPSHP
PIRSIYLYNRRSLDAPSIPLSSSSSSSTDPTRTPLPILLSELPLTPPHPP
PAWLEQLLNQVAGGGPLSQALSQYERLVSLNLAKGHTYVHRAQALVEAAV
RCLEEQRIQRDAGQVASTNLGDHFLAIARDARELRRKYGKQAEGHESLLG
NFNDNLRELEKWPLHPALGRALVEAVREGGGGGFGGDRGETGGALATPSL
SPLGGSGSSSSSSGSSSGRGSSLLMAGLECEAIRKATVAAESTSSPPSSC
RSSSSSWSSSLALDVTLLDCVPVGRVKDWFRECRITRDRLSRWMDEVDES
FKRLEEGVEAQRGREGGRTEWGVEEGVDRGRVTHGGVEALTRQATEQEKA
VALLERGHKEMLDRIRMSFGGGREEGGEGEGGPSSVPPSAKVVGTCQWLE
GVLTRQAGVMAALEGIDHDMTSHVKELVQQKQLTGEWLRSRLAVISRLQG
DIQTLRQNLSIGNQAMHSERRNFLHLEHLEKLPSAYTALLIELARRRVYN
KLFEIKVKGAVDSIARFREAEIQARADFLRQHALHLMPIFAQLFPSMQDR
PPHFQPKALISEGKLPAVSVADILGDAEGGREEGEEEEGLLKGYVSCLVK
ATVGEEEDGGEGGREGGREIMPGAESTATVEELEEKCVAQELIITQLKAK
LQALTVGGKVKKGGKEGGREGGRDEGLEAKVRRLEEENGSMRSCMSAVVS
VMEEVHRSGVGSSSSSSSSRSSSSSSNSGAAAAPPLSLPPSASAQELVNA
VDNAASLVKARLHDLVMELQASKDGGKECQISFREFNVGDVALFLPTSHQ
GENRVYLAFHTNCPHRYLSHESLEGLRGGKEGGAGRFPDFILGKIVYVEE
MVAKEGEPGSNPYHLQAGVKFYVLHVSSEVV*
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Synonyms
Publications