jgi.p|Nanoce1779_2|577126, gene_366 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|577126
Unique Namegene_366
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:909399..914410 -

Link to JBrowse

Properties
Property NameValue
TranscriptId577212
ProteinId577126
Product nameNucleotide-diphospho-sugar transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:909399..914410 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004377GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03620NO01G03620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577126mRNA_366-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577126mRNA_366Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|577126

>mRNA_366-protein ID=mRNA_366-protein|Name=jgi.p|Nanoce1779_2|577126|organism=Nannochloropsis oceanica|type=polypeptide|length=1415bp
MVPRAGGRSLGSSGPEAGGGLLLSRRAIQIYAFLFINTLIFVMRSQWIVS
MPSSLDTSVSSRHDATPSKSDRNGGPEGMGELQMAFERAQREGTISGSKG
RTPHDSLRRGKESSTNSRKLDKDGATSVVVGHEGQLGQQQQYHDAFSHFL
PKDQEVLESIYARGRARIQKELQRRHNNLSSIEPFNPWGPVYIWDWFSPD
YNCPTMERIGRVGDGGKWICGVDVLKEREKCVVYSYGVNKDLSFELELIG
RTGCEVHGFDPTVGGVPPDCKGNEHITFHKQALGPVSGPSDVFMMMETLL
DTMKRQGHTFLDVLKVDIEGSEWDTFKAMLPEKALPFGQLLIELHFRDVV
EVFEFFENMDTHGFRIFMRETNHNPCAAGKLPIAVEFSLINPQAYFGGVP
QPAAVQAIAARPNPPTYNGVVYVLSHKGNLGRLSTMLSTFEKNFNRHYHY
PVVIFHEDFGPAEKKLLKGSVKEMRLQFRQVGFSVPAWLDKAKIPERTPC
SPHSSTVGYRHMNRFLAFYAAEELSKEYEWQWRLDDDSLITEEVGYDVFR
LMAENGKKYGFTNIVQDDAKCVLGLWNATREYVDREGLEPTFFTRWTEGA
VFYNNFEVSHSSIWTSAAYRKFFDYIDKLGGIYYHRWGDAPIRSIGVSLF
VNESEVHQFTDVAYTHLPFISRNASGLPSPGQTLFSRAGGSNHHGDCNGN
STLAGHGLGGVVGHVHGGNNGTCYSGRPSGVVYTVLNDEPGQLEKLLMTL
KSLDLFFTDHFHYPVAIFAADLSFERRTTIRKATRSVVEFHDLSFLASQP
LPGWVDEASVPAFVDCGFGDDSIGDRKRNRYMASTGVRKLAAQYDYLWRL
APGAVLTENVTSDPFATLASGGKSFGYLMTVTDDSKCVVGLQEATKEYVQ
REEVTPTFLDVLPPGAVFYDGFAIAHGSFWRSPEYQSYFQFLDEEGGIFY
HRWTEANILTQALALFMPTEEIHRFSDVGFEHAPFVKQSTNRAVLKKQLD
SVWKDRSIAATPAPELSALLAPRRFGFLGSDVATSFRLPSVAGYGAYMWL
LGDTFLGTSDGSRREGMHSTISNALAFLPSGADLGVESGELLSPSDVTFF
WGYDDQGLPTAPFERTAGQESGTVLWPVSGVSVEYGGMAKIVLFAQRVRK
THELAKFLGVADAMNFEVEGTSIIIVENPAATPSRWKYRVSDLPGTDASH
NWFSAVAVEGGKEVVDREEDVVYMVGNVGTRGLGVYDDEASKNVLARISI
KELLEEEWGRMEVLVEDGVWARTTEAEATRPERRKTIFSPANAETTLQYN
MELRAWVTLAVDGVTAQLVLWTARELTGPWMSTVIHNIPAPFDDLTVYKC
YAGKGHPELAEPAEPGQGVELVFSYVCNSPSDSSLLFEEGMGELYAPQFV
RVRLGVAEKGRDAI*
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Synonyms
Publications