jgi.p|Nanoce1779_2|669588, gene_3654 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669588
Unique Namegene_3654
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:872972..881915 -

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Properties
Property NameValue
TranscriptId669674
ProteinId669588
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:872972..881915 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03250NO08G03250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669588mRNA_3654-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669588mRNA_3654Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669588

>mRNA_3654-protein ID=mRNA_3654-protein|Name=jgi.p|Nanoce1779_2|669588|organism=Nannochloropsis oceanica|type=polypeptide|length=2939bp
MADDKGEHGHPPQKLQEAEPGEEAAPPSSPSPSTPAMQQQSNIETEEDEE
TMLHCVRDTEDAIEEVLVATTERGDEDSLQQQQQDDQAPSDAAEMASKDD
GDASIVGRPAPPLLQLLMTVLDDSTGLLSALKINTKREAGPLDLALLCAS
RRPPWTLFVEKSDISGIDGIAAGPPSIVVAQERALVLRRGPDYSRASQVQ
LKLPAEEPLFLPGCWVVAFAPSIKKEKGKATDGRVAVAGWSGAIHVFSTT
MAVAGAATASSFLSPALTIPALHKDTHQMPPEEEGLVADLSWRGSTDLLI
LRYSGSFQRLTLRPPANAPETLEVVGQGEGSSGSSSRSSYMMDLKPWHRG
GCSAMTYDHSSGRVVVAGGSLRQQPRSSSGSSSSSSVTVWRCAPEGCSPP
LIIEHQFSIPVGNPLLLKPTTVRHQQAGFFRRWFGGAGLASALDAKVPVQ
CPILHLSLSPRGGKLLAALDLEGGLSLFAFRGGGSRSKTSSSCSSDGGAW
GPLGSRMTSLPIGDPAARKNFSIAAVAWWSPSALAVLDKKGHAQVFKVAA
AAAAEAAAAATTGEQELRFRPLLSTDLPVGRGASLASAGDNCHLLALQCY
VGLNGRLRGKLVRVERQSPEEAMLSFGKAGQVIDALEVATQYGLDTDPMF
KAVWLREGGGNGVREVQEVLTHVRDTSWVVQQVLDEGGREEGVDCAVLEV
ECKLALERTESAGEERAKMAGDASLCLLRCKVLELYDRVKTFQVLFQGGT
SATAAACKLSAAASASAPAPAVAAAWAAFYRRPLREVAEDVASEGNVRGL
LHIIHQHPLTLGPADIADLLRLLPEALPPSSYQQLLPGLMKSGGSGSSNR
GASHLQLGGRRPLDWVEEGRLPKEWEDFWTPSTLERWYLTRAEEVERKGG
ALGGNVIELMNIGLARGCPERGPLSNFRAEVWHLTKLLYAGFLGGGRMEG
EAEGGNALTLQAWRALPLRLVMRRVLEQVPLVYMEDPPLLVQTIESYLLP
MVRGPLALTRAEQQQQHLGVGGDDVERALAEEVTDLLVAAVLNARRERTA
RQKEVYADQYVAAHNIIEAWHAAEIRTEIMLRAAIAVARASKPNLPSDRR
LFRCDADLFRLVLKVCRAHDTCMEPSGAADLLWSLIECLPVASEEAAPEL
QSVQIDVDRLEARLTAAQYLSNYSITLPLSIYERFQTEIHSGALLPLEGW
QTDFRALAAWESVMPFSLKRGRAAIIDDDSSSSSSKTRLDLQVVARMAKH
LAISLQGLDEQQQRQQHQHQQHGTFWAEIGEDIRTLQSGGIFHTLPLLPW
AQGLLYAALKGTSSGFSSHHSGATSPSRRPPPPPSPPTKALLASAMAGLQ
LPATAVEAVVLQLVEDWLQEADSGLDAGVGRARTLLAALPFSSSVCEREA
RWLEGVALASKLAGDRGWGKADLTPVEVREAANGGYGMVVLRAILETRPK
LVLTEDGERDLLRLAELLDLEKGTVGVLKGETMRVAVGLGEYEVAAMSLL
DVMPVPKLLGAVVGGEGGGGDEGGIDGEEVWELVFSLLISASSGSSKSSN
SKKLSVELMNRLLHRALLTAPPHQLPRFVQVATEDLLSTAWSSSSLPLSS
SSLHERSLQKLALEDYKRSLQLPGESGKEGEEGREKQRDDALLGLVEEAM
GKARERLMLASRTSQKLYKSPSSSPIFGGNAGQAMPASTAARAAQEWLER
ALVFLLGLGDGRRGVAWAREAVAQAEMKAQEEAAEAGRRAQMEGDTRLAQ
GGGGGRDGGREGGDEGWIVKQLLAKGYSRNGAVRTARAAGNKSVDAAIQW
AIAHSHHLGFDDPLPPSSSSSSSSFTSPSSPLGGLGNAFAFPRPHSPWRE
EKEDGVGGGREGGRVDGQMLELTKNLAIRYLCLEALVTANAAGAARLYCA
TAEELLKHTMAMPGPPPLLEEGEGVREESLAILCRREVAAYSQEAGWAGL
VTKLQAFVPWKLEKGRLRSDDEYRTSAVLAAAQQDVAGAWNAAMVAAEGW
HVDKEEMGLAHVEYWFRGPLKEGWVRFGAAGAMEAIARFESVALGKKANN
SSVVTGEPNLPASSSLLGSPGSAGALLIASEARAQKVLPRLAALWEGVDG
RALPLLELLGRIMVEVAAMAEEGREGGQGGGGGGGGVSKRLKDHAQLLRR
LVRVPGLVPLLDYKALTGNTHPFLFPSSQHCETEVETAAIGGGAGGAGAG
QVLQTAYHELVRVVRRDNVGALGKLAPRILLPGTAFPLSASTINRAYADA
LLRGLDPLLAEEENSLPLARATPPERFAHRLFLAEPYLERMTPTDLIGLV
EGLCVPRRQKGEGASAVAAGYGGGVLVAVGPCLPSVVDRLAVVHKAASLL
QQGKSSSSSSSAAEAFLHQVTGLLEALMLCGGEKSSDGRALESAWVQGAD
VTSLLESMLVEGRGGGWVGIEALIASLKTATTTAATTAGSSSLYSCIILP
VEGAVGVLVAAVKHLLSAPLPFSKLHLKKLEALLRASVATSNSSSSGDEG
VEARWALVLPLLLEFVTMEEEEEGGGSEERGEGVSAPTAAAAQSRRGGVR
ADVIEMVLGLGRDLGMEGGGEAMLEYHRAAEMMWEGLGRKLSREEASTVE
GRVQALLNALEGDKALEKTGAETALALVRMWGGGILAGGGPLGLNIDWSR
WVVGEEEEGKGAAATSAPEYDVIYRRLTERALEGRKWNGAASLLLWSPWR
YRVRTTGTLNKEEEEEALVAKLDILGAPFGLKLKVMLSSPHASLRAEAVA
TLPALLGGDGGSGEEGGDGAAGRAVHCTSIVTLPRTFSPPILASDEILLA
LITAAFFPPPPAQDPLPFLVSPAWRVLADALLLLPSHPKASQPLPLPASV
AFVAARLVAGRAYLQAGALLAEDRQLHPALRTVEGVMSVLWTTLFSRTYY
YGEQAEDEDEGQQGRRDEKLWLHVRDAAKVVLEADETD*
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Synonyms
Publications