jgi.p|Nanoce1779_2|637887, gene_3611 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|637887
Unique Namegene_3611
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:765657..770260 -

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Properties
Property NameValue
TranscriptId637973
ProteinId637887
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:765657..770260 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015914phospholipid transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02790NO08G02790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637887mRNA_3611-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637887mRNA_3611Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|637887

>mRNA_3611-protein ID=mRNA_3611-protein|Name=jgi.p|Nanoce1779_2|637887|organism=Nannochloropsis oceanica|type=polypeptide|length=1277bp
MSIHDSSTGLLSSMASMRRALSLRRTESATADPVHRVVVVGDEEENKTKL
QKEPHRAGPPHTGPGTQTNEVITSIYTLYSFLPLNLRRQMSRAANIYFLC
ISILQCIKAVSITSGVPTTALPLAFVLFVTAVKDAIEDFNRHKADATENN
RLGHVLLKEKHFDLHHPHPTMWCDIKVGDVVVIKNRELIPADIVLLASSE
PSGLAFVMTANLDGETNLKAKEVHQELRQLPLPAKLAGATVVCDLPNNNL
EHFEGLYTLGPEAGERKVPLTQRNILLRGCMLRNTNWAVGVVVYTGKETK
IQMNTAEATQKIGSVRRFVDRETVMVFGLQVLCCLCAAVVGGIYVGRGGQ
MPYLWVGARLPDPALSGFIQFWTYTVLFSNMLPISLLVTLDMVKFLQGMW
MSWDLSMYHETRDPDGNLIEIPCVVRSSDLNEELGVIEHVFSDKTGTLTC
NIMEFSKCTIGGVSYGLGLTQIGRAFRERNGMEIVEPPLRDPEEPVTPFV
NIIDPALVAVMKDEMHPNHNKCRDFWLALALNHDVMPEGPEDRLVYSGSS
PDETALVYAAKHHGFFFTAREPGKVTVKVKGKPIDFNVLHVLEFTSDRKK
SSVVLRRENGSIVLFCKGADNIIKSRLSSTLNSPTEMAGIDADIAQYVND
GLRTLLLAKAELTAEQYEDWARRYHEAETSFKDRDAKRYALMEELERELE
MMGITAIEDKLQEGVPETISALRQAGIKVWVLTGDKVDTAINIGHSCQLL
STEMRFLRLCGEDGKMVLDKQKVPLKEPIQEEMRSMVEAETKAAAAVAAA
AAGGGGKRKGKEGKLPPRALIVDTYALAAILKYELQDLMLALCHLCVSIV
CARVSPRQKALVVEMVKKADPSVQTLSIGDGANDVPMLQAAHVGVGIFGL
EGQQAVNNSDYAIGQFRFLGDLLLVHGRFNYRRIATGVLGVVKYIFYKSA
VLVLPQFFFGIESLFSGQPIYQDIIYQLANVLFTAFPIIAFGVFDRDVPV
KQALASPGLYKDGIERKFLNRHVFWAWMLEAILHALLIIFLPMLALGYFN
VLPTAESVSIWELGTIVFLSFLTVVSLRLAVEVLEWQVLISVLIIVSLLF
WWLAWAVLNFMLALAPSIYGSFLVFPDSSRFWFVYLLATMACFVTMFAVE
GVSVLWHPLRSQLIRERLAEFGLEKDPGGDKGGHCAATENRSISNGNGYA
AAVMVPVEQEQEEGRVGLTKAAEKVWGLQTWARTAPAPAPAPAPAPALVL
KAAAGHSDGGDAAGAGIREGERLMDD*
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Synonyms
Publications