jgi.p|Nanoce1779_2|582735, gene_3601 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582735
Unique Namegene_3601
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:745564..747578 -

Link to JBrowse

Properties
Property NameValue
TranscriptId582821
ProteinId582735
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:745564..747578 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004148dihydrolipoyl dehydrogenase activity
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02730NO08G02730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582735mRNA_3601-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582735mRNA_3601Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582735

>mRNA_3601-protein ID=mRNA_3601-protein|Name=jgi.p|Nanoce1779_2|582735|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MRLSLALLTLATGATAFLQPKPALHLMSASRRSTAAPAATTPRFRVLSTR
QGALFMGEQYDYDLIIVGCGVGGHGAALHARSEGLKTAVFSGKDVGGTCV
NRGCVPSKALLAAAGRVREMKDAHHLKALGITVEGDISYDRASVAGHAAN
LANKVKGNLENSLKALGVDVIEAKGVLAGPHKVMGEGKIYTAKDIILAPG
SLPFVPPGVECDEKTVFTSDGGLKLERVPEYVAIIGSGYIGLEFSDVYTA
LGSEVTFIEAMDRIMPTFDPEIARVAERLLIKPRAIDYRTGVFASKVTPG
VPGVKPVRIEMIDAKTKELVEVLEVDACMVATGRVPNTKELGLGEVGVET
FRGFVQVDENMRVLTKSFDEGGEVVPNLYCIGDANGKLMLAHAASAQGVS
AVENIKGRKHAVDHDTVPAACFTHPEVAFVGLSEEQAKAKGEKEGFKVGK
SIGHFRANSKALAEGEPDGIAKVLVNKDTGDLLGVHIIGLHAADLIQECA
NAMAAKTTVNELSMMVHTHPTLCEVLDEAFKGAVGRTAH*
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Synonyms
Publications