jgi.p|Nanoce1779_2|537460, gene_358 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|537460
Unique Namegene_358
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:886034..894643 +

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Properties
Property NameValue
TranscriptId537546
ProteinId537460
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:886034..894643 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03550NO01G03550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537460mRNA_358-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537460mRNA_358Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|537460

>mRNA_358-protein ID=mRNA_358-protein|Name=jgi.p|Nanoce1779_2|537460|organism=Nannochloropsis oceanica|type=polypeptide|length=2194bp
MNPLSISDSVFGIAGPQILFPLLEVADSPTALCVVLELVKVFCRGHTANL
ECMQGSGYRVMVFLLARKKHLFSPDVLRACVALAVDTKTKAKHDSRAASF
SFTTASSAPSSFFSSSKVLVDAAALKYLVLNWELWGGSNDRAIVIALLKE
LNGLVAPQNPNAVFNAYRLHSLGLVRWTLSVMMQAAKLSSAGQAGGWVLP
RISLEDAHWARTSAALPDKLLTRCGELLQRLLLTRVAENDVNDMASVLLS
TVAQRPSSEKFTSTTTDGVSINSIATTTLKSSLHPIVEVVKVSALNGAKG
VLSAQSIVRIYLLEILIKVLTRQHDRIRQSSGGGAQGVVKKVMGFFSLET
ERLVGKPVGGSGGSSGSLAGAGRAGSGSGSSRSKSQCSEVVFPEDRQEIL
KAFSRCLSPDWFHSMLDSCRDALSISLTLRALFILFQEREDFVADFAEYD
TGFGTLASSLPRISSSPIVLLPLFAMVVGMPMSQVPPLPDLKQTRLNALL
ESLVSGEESMHRLCRPLFGALMTALMENLNRNLLLGLTEEDGEVRVRAIY
CVEETLGALKEALQGSMSFMEASKSKEFIIPVVQSIFACADVVDLLQQQN
AGGRKTAKASEELLPLADGFNGGGSSLPPTPGTTSSNSSNSSSRRFTTTD
SSFSTSRSSVDARHNFEGAEAQRLLLLLKLVLRDSFLTPTGQAASDSTSA
HALVREAFLAFPHTAMDAHIFAFYQTFLVLLTDLIKEALRSGDGILVGNT
VAVCSVLFEVAQKGLLPPPLLATALELCLKAAREISGTRINKSLGSDLQQ
LLLANAISIGQAFSVVALRRAARYVDATRESEAILAAIHAHLHLLLSHTK
RPVRGTASLGLSGVSTGGAGGLPPSTRAGPVNSMSSVLSRVHDLCAQFGP
DKDEPFVACLLSELRVFLLCGSEGGRYGRRRLAARVCEVLLKQRQNVMAE
LLSFEVREKQGKSGGKEKKILDIYSRGFLLLSSGVGEEGMGRGEVEADAR
LERFEEWFSSAEAGEEVTQVFGMLRDKADMLLPDDMIPTVDVLNRLQAAK
VPAFSLGQSSAHARLTRGEQLNVRKAFETFINFHQHIIRSGLADIANGSM
HWKEVLCSLRGVVSVWEGVDVHKGKEENRWATASPDAKEAATRSLHQNFM
WRLDLTEGPERMRRRMKRNYEFEEVYNVMERPVLEPFVTGQLPSGVVAAL
EEEEKGGGGGKGATTKLIKQVALVHMHSGVGRGGEKVKGYRRHDEEYDEE
DLIDLYESEDGKKGLVELPGVLNRAADDSQLISDVDTTVGEKKEEEKTGK
KLAKRVERRKREEDRSLSLAGSSPDESRGEGERDELIAGFVDESDGPILR
LYNVQRCTGLEVNPALLLFCRHGLVIVDGFAKVAGGEGSSSGSCISIKRV
ALSSTAYSNSNATFSGATSSTSITDSSGTYRSSSSIPQQVNPPHVERMRF
DRLKILYKRRYQFRHVAIEFFDVDGKSFLVALQTPDEQTQVVDLVMDAPL
VKSVFWSNNQDGALQKLGGGGRINYKRFMAHWRQQLTSKWQNGRMTNFEY
LMHLNALAGRSVHDLTQYPVFPWVLSDYTSVDLDLNNPSVYRDLRKPMGA
LGETRAKQFRERFDQLASLVEDLSPEEAAGEAPPFHYGTHYSCAGYVLYY
LLRLEPYARLHLQLQGGKFDKADRLFRDIKSSWDSASRENLQDVRELIPE
FFYLPEFLTNHNQFDYGWLQKGLAVNHVMLPPWAKGDAREFVRLQRMALE
SKYVSENLSYWIDLIFGCKQTGPEAVEAQNLFVHLTYEGVVDIDAIQDPV
IREATIAQIHNFGQTPSRLFKRPHPVRRVPVPLQSFQQDEGSVTLTGGTA
AYTTPSLCIVGAPQTIALRPTSTAQLGAPYGGAIPSAVQPVGDVWTVKDR
AVGVGLDCALVPPNLVKYARYGSPDYGLAFRVAVPTTRHQYIDRVVSVHE
QLHLGAVNCLALDEAGELAVTGSKDSTIRVWCIGGGGKTLSLQATLCGHS
NEILCVDVAAQLGILLSGGADRLAVAWDVRDFTSQRVLVGHASPVTSVSI
NKRTGDMVTLGGVDIRVWSVTGEPLAQVSAIAVVKEVPTCVVATDCPEWQ
NGVVAVTGHDNGKLCLWGLQNFNTGTTQGRQLRVMQILQGVHTASITAIR
VGRDQRDLAVGDAMGRCSRWASVRLDQLPEKEIMELALTARKM*
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Synonyms
Publications