jgi.p|Nanoce1779_2|669517, gene_3562 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669517
Unique Namegene_3562
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:658685..664951 -

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Properties
Property NameValue
TranscriptId669603
ProteinId669517
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:658685..664951 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02330NO08G02330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669517mRNA_3562-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669517mRNA_3562Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669517

>mRNA_3562-protein ID=mRNA_3562-protein|Name=jgi.p|Nanoce1779_2|669517|organism=Nannochloropsis oceanica|type=polypeptide|length=1946bp
MKGAGTTLGHASRGGDGSAARGSGGSSSIFLVNQVDDEEEAAALTGLREE
VVREAKKRGTPQDVEGTVLKLLSQQQRETSWLRQEKASLLAQLERAQREA
ADLQGRLSGSAPETQVQALLDSRLLSTRLSLRDTEQAKAVVDLIRTIHSF
GTESSSSGSTPMPGSSVTLEQVQATEGKRNLNRALRCLLMENHCRVNSCI
AEVVKFTDRKHQEQHETAGAGTGVESPNIQMVFIEGESLIFRIMDMRLQP
RDVYMLCSLDEAWPRGGGSWGLKSLFTVSDTPVLFSTPFQLRLDAAARGP
QGMLCPEWVSSVDSTTSRGEAVIPPSYRARIKDNSTFLYAPLRESAKELL
RSSDMGPFEGLALAFLERVRKLDLMLVSYEGPAEIKVVRNVQHEVELQPV
RLPGEGEVVESSRLRALKASVRVVAHRVADCLVRCTKTMRIPDRNYQDDG
NGPVERRYRTHEFQVTLEDSEGVGKAATTTTTTRIALAFPLSSDGLPLPK
GRRVKENNGRLHTESLYCQMPIPYAGKLPFALQADFDVTSDMLGLHPTSG
WNHWLLSCTVRLFVLAFLTDPMLRGAVDNYTPCAEEMPAGGLWHGVQETL
EHLLQSHVLVRTESGLMVARAQTVMRPANISRDFISDELLREATGGRKHF
AEVSDAGPAPVGAGEGDGEVDKGQACTLEIILQCVERLMASNKWKMDTAL
LQQLWAFVAGEVAKNAGVVSPASMELLQEKLPVYPIQGRVELRRFNHGGV
SVCLSVAPELEAVLKGLDHQLRALLVPSLDLGRLCGSRGSGMMTSLQDAL
RVVGVRTATLESFQPIIRRLLRQEQSSPTGSPSSESARVPAMALDADRFW
ALRSLVVEGLGFATLREFLGNKASMSVPVLDVKPSGELGPRLVRVDQMED
VSERFVLPSFLGVALAATEKKGSVLLQAAASWDQIPKGHRAGGMLWAPEA
ALQSWDALIRWEACVVKELGVDGGSNRNWRSLFEVVLSPVDLADGIMKGL
TAPGTTVEGRRAFTKLLESYQEQHAQVFEQMRATHRLSTCQLLDLVNDPN
CARSPQNRYLTFSQQAAEGLLALVTKGTAAPTIDQLQEMLPVLETEQWPE
ARQFQELAQLAVVDLDSLRAVALALHILTRRLAERGLLVNLMQESQQEVA
AVATERMDVPSPPSTLGPKALKKGNEMWASLLIALFRKAIENMSLSYGLA
IRNRKRKRPGSNNNSQENDVALFEAYCHQYGFWVSSSSSSPACFPLEQVV
WSLEDPIARYVTSASVSTATVAGEYHASCVVLDKEINGLLETEEEEEGTS
DMVRRFFIASLRVSGERFRDKFLILLRDALERWSQARGPMPRDVEVMYRT
LATVLVPPSSVATTTVGIGEAASAASGVAAGIGGAVMPSASFSFSEIPVL
KMNLKFATLAVLSPADAAIAASATSSHVLHLRINGGSSSNICNNFVKGSV
QPLVGVAGSGDSDDGALDWFYREFFPSRCLHPAIFSLFKLASSMLLSRLA
VAKPRSSFLESYADSTSSMVSVLRAMNVDAVNVAKMLGELYAGPTLPRTE
LARYWANVTELRDQVLTELWKAKGLERNEELIEAARTCLKLPLCAKPPTP
GAGCGMWGTETTVTLVNALQSAEAQAPVYLGSLLGIDLELQDKQLEEIPS
LVKHPGANRDSSWHRASRAEDGFGSVEQGCYWERFLLALGVKPLTEAHIP
LISTQVLNKVFLALAKFNALLNSSEPTVASQYNIWQSYHVLFRLVDGNMY
ISRYAEVRAAASAVADGGTGVAARQTLATSAAAALTTVQQQQQQQQQQQQ
QQQQQQQQQSQAVQAAASGGGFAYSYGAGALQPATSYLSTYSLPPVPSAY
GAAPPPPPPPPTEVHSGFAPPPLRRQRSQISSAVVGGIEGNSGANTAASG
GGGMSSPNPDGEPATKAPRLVPPVPPLAPSPVQQEEEVEEGEIED*
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Synonyms
Publications