jgi.p|Nanoce1779_2|363926, gene_3531 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|363926
Unique Namegene_3531
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:586621..590467 +

Link to JBrowse

Properties
Property NameValue
TranscriptId364012
ProteinId363926
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:586621..590467 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02040NO08G02040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|363926mRNA_3531-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|363926mRNA_3531Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|363926

>mRNA_3531-protein ID=mRNA_3531-protein|Name=jgi.p|Nanoce1779_2|363926|organism=Nannochloropsis oceanica|type=polypeptide|length=1155bp
MPEPSPSSSQRMPAPLDNTWSCSLEDDLSQLAGPGHGSGIAFLSSLRHNP
GLAPFLKPHFDAASFTAQVVVADSASGAGAVGIRLNSSSALARSRAEIIV
AQLTEQLAQAEAAIEKHILQHQKQLMQGMGDLGELRENCGVLTVRSKELR
RSVNKLTTELLEPYQGTERRTQQLRRLHEANDILKKVSRFSMTLARLKKE
NSSSSSGGDLTGRENDDAVAVMEGLELRDLAKAAQHLQEVESLFQDPTLG
GISLLAAERPYVTTLGRGLRRTAKESLQAALQSMNQADLGPALQVFNNLR
HLAPVVLECISTVVAEATEATRRAFDPHILEKVASVATSTTAALSSSSSS
TSSSPIGATASGRASTAELEAIALRQRRARFRDHFDEWTTALYGCAIKTW
HLQRVLHKKVDAITNEGFLDVVLQSVDFHKAMEHVLLVSAEAGGGGGAKN
SGAGLNRGHSRGSSNNCGNGNNNNNNNNKNNNNNNNNNNNNNNNNNSSSS
SNSRPSPSSVGALYWMFWLQLTAAIRAVAEKALKHATPSTTTTTTIANAV
AATGGGPVLVVKLYPYILVSLTDVLDRLVESTSKNKLGFLSSSPGAGGGS
HFQLHGNPVALQVLMEALGVDERTHSAMLIEGEEDQQQRQQQQQQQQEGH
HTSSTPSSSSSSSSAPVIFLPDQAGGSLEEQTSLIEALGGLRDLYLGESL
QRLREPIEQMFFTQEGYQSAVPSRQDILALSRVMRTDLLTGLAEGGPLLL
PHLVKGVVKAVHLFCTKIEAMANTSEGARNLYALRGWMLGPEKEHNLQLL
QLVAFLHQDLRKLLQDLAAAVGGREEGRGEEGQLMEAVMALESLAVTRFL
HPYMMDIVAELGGILAEMHLENYAPGRQQQQRQEQQQEESDGQGGGGNSR
FITSFQMAVTGMRKHHLSKFPLQADFVIRSFKWLTSRLLRLYVSHAALLR
PLNEAGKTKLTTDMATLETSLSSIHPKLSELGAPYLELKAFREFSFYGDE
QNPITVNGLAKERFTAHLRPSTLLDALFARAPLELSSPHVLQRCSERTLV
EELLALYYNDKVEGREGGEGENPRMTAESAHWQVVRVCLDAYAQRMSASQ
VELAYVYDVMLNLGGLLLKGFGERLVKGGRDSAGREGKDKGSSAVVARVL
PLNW*
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Synonyms
Publications