jgi.p|Nanoce1779_2|663152, gene_3492 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|663152
Unique Namegene_3492
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:492658..499048 -

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Properties
Property NameValue
TranscriptId663238
ProteinId663152
Product nameER-Golgi trafficking TRAPP I complex 85 kDa subunit-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:492658..499048 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01640NO08G01640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|663152mRNA_3492-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|663152mRNA_3492Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|663152

>mRNA_3492-protein ID=mRNA_3492-protein|Name=jgi.p|Nanoce1779_2|663152|organism=Nannochloropsis oceanica|type=polypeptide|length=1894bp
MLRPRDGGYGSDSHPAPAVGALVTDEVERVSWKNGLLFHELLSAFSAADN
VVPFRSGSHTLQLHEFRVQFVKASEMAPRPRTLAEAQLAEAVALREGTFE
AQSAWLSFEEREGGAVVHVREREDISDALAAHEGRMPWYERFRASLRQSL
QYMEPELLGCPAAMLLVVSSSDTNPIERFKELSLAYHWPASFQTGQFGTH
DIPKVYVLLHDETEGIAQGTNGLIHAAEILRQMKAEFPTSPSKLLRINSL
PPQSANLQQADIWRLPLQQQHPPAEPFFPFDSNCARVRHPVVGGGGEGGQ
SVRGACLSSEDLLNLRDFVLELTWKIVIPALERRVFTLQASVTQSRKGVK
NFVKSFWRKPRDSEQPPQQQQHQQQQQQQQQPDGGIFLRSNSPSAVSLRP
VLYRYDRIESQIRLLADTLFMMQDWEGALSNYKLVRDDYRSDKAWLHLGS
VYEQIALCYSHLNTGGLEDGGGGAGGEGGREGRYKRDVEVAIEEAVKAYF
RRAEEEEQQQLGVGTASGVPYAAGRINGEVNSSSSGSSSHSGCGARMATR
ASLRGAEVFLTASPPKAVDAAILLVSAAKKETPLCAAVLVEQAAWAYLQG
GNIRKFAFFMSMAGQTFLSCSSEKEQQQQQKKQHQERHAVRCYASALALY
EGSWWEHALDHIHLNLGRQLLLLGHPERALYHLLRLLVTSDHAASGGGRE
RGGGSGLSAKVQATLLQDLLQTCRDRPAALAAVVPYLDAGSKTFVAVLCR
GMQPQQQQQGDQVVVPNLRLPWVVEETLSISQGTEEPQGGEVEEMKGELQ
RELKTAAVMGEKGGSMRQWVSALGKVAKEEARSAALLSKRHGGSGSGMRW
GGRDEPITVSVEVQNPLQISVTLTDMQVSASFDDTQASSSSSPSFSATGA
GAGAAIPLETETIEVHLAPLERKRLSLQIRPRRCGTLRVTGLRWRLFGQL
WGSISFSAPGPLLQDTLEHRASRARGMDVKFVTRVVPELPLLEVEWEGLP
EALFQGEVVKTFLRITNRGLAAAASVYAKSNLPSWLFMRDPAEVEKEQGV
WGGVCMSMVGMSGTVFRVATGGLPGAAAGGGCTVRVPVWVRGLGGGKQTL
RVLVRYERQHATGGGGTAVGTESQEYRYTEVAQDVCVLPSVSVVPSVSPS
YSQPGECILSLNVSNYRTDGSASDREVELHSVVALSRLWRLEPIGGILMG
GGGAATMGWQERTTLHYRLIPLEREEDLVVYEHELQSGALRVSSSTFSLS
SSLTSSNSSSTSTTANSMVIDDGFLPTPFMTSLPSSSSSSWASLDFLYVE
NASQSYRTARDEAKRRETTSAAASTASNGKGGRQECGPLSLGEIKRKKAE
EKAREVAAIESAAAAAAAAATVGAGSDHHISPTSSSSSPEHRPMSPKLGM
GMEGSGRKGHLAAVVPRGRATLTLIVIWRLTTTSHLKQAQAHQQQEGEQQ
QRPQTRICLGQHQVLNHAVRPLTLDPTSAAPLTITVDAPSLVMGRLAHSL
AEGAAGRREGRKGGLLQNCYADVLVTVHNRMTDMSVDFVFEALSAPSGKR
QSANKAAASPSFLWVGSTSREIKALLPGTSVRLPIRAMFLRPGVYDLNRF
RFVVLMAANASQLVPGALNSSKLKILHGNTVRVPYIFSAQYLIKVEASSV
AAAGAVGAGAAGTASDVKGGGRAGRISSALGLSGEKNEEVKEKEGGKAGG
WVDDDLSERLVVLVEQARAKGGSGGEREGRAEEAESMLLSPAPLVGGEEE
REETMEDVDTRLTPLDRSLVGTREEEEAEEGGGRGESGASFSPPLSMVTS
SAPPRSYASPMPVAAAAAATERAIDGEREGKGEGGDGEVEVEVAEDQTFS
TEGQEQARQQLELGEVEGEGEDGMGREGGAEEDGGGEDGSRML*
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Synonyms
Publications