jgi.p|Nanoce1779_2|582284, gene_3477 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582284
Unique Namegene_3477
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:451557..455563 +

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Properties
Property NameValue
TranscriptId582370
ProteinId582284
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:451557..455563 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01500NO08G01500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582284mRNA_3477-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582284mRNA_3477Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582284

>mRNA_3477-protein ID=mRNA_3477-protein|Name=jgi.p|Nanoce1779_2|582284|organism=Nannochloropsis oceanica|type=polypeptide|length=1285bp
MTPTSSMAFVQAARTIRDYLHTLEKDKQAEVNHLSHQERSFSLFLLLSQQ
LRDLTVASTSTCQSPAPSASPGRAASPPPWSFCYKESRGVQVETALTLLL
LWVRLVKRHPSPDEQALLCLTMDCLASLVRHDRIFQYLIIRLWNQRSDGT
RSSIPGVSLQTFCLETFVDWRRSPAGRVENEACSGKNYSKVPVTSSQLAS
LLRLWDGLAARQPLEVQVENYPMLTDCLLHPIFTADSTPVPLSPTRRERT
KTPAIMTMERKKEKLKRRGGVKRRSGCARGKGASPHVAPGALRDEEEEEE
EAGREVKEEEDEEGEVEGREERDGIPDRLTMNTNGYQDNEEEEDPNLLLL
PSLHLLAHAARCSPSFRLFLKALDYQEEHLIFDALLSLVVSAQSQPSTTP
LMALATLGTLSRLIAGDAHFESRVFDRGNVRETTKLIFPCLLSFAKDVGW
EEGERARAAADLWGDFLSSPLVLGLLEEEDERQEGEGLPFFVANAVVALG
DIKDGREEGGENIEALLRALRVVCEESPIGQSLLTRSVLPLVDGNEEEGC
EGGEHSFHLTKLAELALSHHVPTAMESLALLQQLFVGACGEKSPQLWAAL
TGVLTSATIFSSSSSSSSHGASCPSRSRAAPTSASIQLSRSPLRRHRLQA
VAAATGGANAGARVCAPSLLNLLVDRLHALADEVEVCCGGSGLEGLEIGS
RGLNEAVFLELEWSLRPVMSMLSWMATTAFCHAPSLPYEVDLRKEIALRL
DARAVSVIVLGVAHVQVWQDEFKKMTVVHNPMSSTESFGLESNCLSQVTL
MEKVRWCLSSMYPLERFELVLRGCRLMLLVGSVGGTTSGGAEEEEEEAEW
TKGCPGRSVSNERPRHRHWLSIALNSSPVISILAAALHQGTDRELVSQTL
SFLTDLKNMNNNASRQSEGDVEEGPEWSGLMDGIFRRNQAVHGCLQMFEK
EMTDAANANGKLIMELRDNIILVEEAEGERVALQAAHDQEMERVGQDWRE
EVLKMREAAKAERSKDKAERAEIISDREGWQARAQAAETELAQVQEAQQA
TAVEAAALQRQVEALTVQLMQCQKESMTHEGRAAELASEVVEHRQRAYDA
CRHKKEAEDVVRKSNAQVDKALKKMTMLCDAFKVKDEAARVDKARLRKLD
VHVGAVEKELAILRGRLAETEGENRRLTALCEAEVAHREQEEQAREEVME
RMLEDMKALRTLVEVKTEAMRELEYAHQQAREELQQKDGLLMDQEDELRR
QQHAAVLIKRLVTAVEKDDEKGEWEEGGRERQCL*
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Synonyms
Publications