jgi.p|Nanoce1779_2|359608, gene_3405 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|359608
Unique Namegene_3405
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:234294..238749 -

Link to JBrowse

Properties
Property NameValue
TranscriptId359694
ProteinId359608
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:234294..238749 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00163031-phosphatidylinositol-3-kinase activity
GO:0005488binding
GO:0016773phosphotransferase activity, alcohol group as acceptor
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00770NO08G00770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|359608mRNA_3405-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|359608mRNA_3405Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|359608

>mRNA_3405-protein ID=mRNA_3405-protein|Name=jgi.p|Nanoce1779_2|359608|organism=Nannochloropsis oceanica|type=polypeptide|length=1110bp
MAQEEELIPVFHSMGFDENLCSVTSTSSSGGSSQDEGWAEQAEEEEALLL
PKFTSSKTSATCVSTSSSVALMGMACRVLRLELPMEADFNSFLGVEKEEL
IVTCQLLQGSMSGDDDQAIDVASTGFPTSYHPSKGQICWDQKLVAVPVGA
LEREIASSSISSTGCHAPVPDPSLHFMLWSSSTLLGHADFPLSAAANAMR
SVRRVVFRFTQGARASTKVFGLRGSCGAAAVSRHHQHASNCNASSLSTQI
PSRVRAQEPSLSRRSISEPSPMHDGWPPCTSSSPVTNTHASPLIPPISSS
IIPTSYSIIYYGWPEHATLVFELLYSSSSWSSSSSSSSSSPITTSTPPPP
SNPTGEPTVSQRLQLVLTRPSDAVSFEEARLLWVHRHTVIPPSNRGLVKL
LRALMVSSALRQNIIQEQQQQEQQQREQGLDNKDYRQGVNAGETFCSCPV
QEVLHLWREGKRNLPVIDAMKLLSGPFSHPSIRALALKTLSDTSDDELGF
FMLQLVQLLRYESVEIRTRTTTNAVSPITTLAATAALPVQRKTSVESKIP
SLLPPPSPMLSSSSSSSSSSSSSSSSFSSSSSSSSSSLPMNMTPLAHLLI
QRACHSSNPHLRHALFWHLAVEMQHSPSPSGRGFEAVRFAFLYSLRETNE
AAYTSLCAQEAWFKKIAKIQQQVLKAPGLRERKQVLLRSLLSERGVSEAP
LPVPFPIDPSMLVKGLDAARASVFGSTTYPALITFWSPNEMGVLMTVKPS
STSSSLSAIAQEITEKEEEEEEENENEDRIRQPPQNQHYHASAHAQGKEL
VGRMTHLPLSFTPTATIPSSLSLSSSTSNCPFHDRKPTTFPSSSFGGNNG
STCSRSNDTYNCSSSGKNSSRGRRKSDDGEKTLIFKCREDLRQDQLVLQL
ISLMDTLLKRDLGLDLCLTPYRVLATGTQEGLVEYIPNAHTVADILASAP
SVCATAAAAPPESVSSKPDPVGGSGSKILAFFREHHPWKKGGGGEEEEEE
EGGLGVEPHVLDRYIRSCAGYCVITYLLGIGDRHLHNMMLCPDGRFFHLD
FGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGL
RRHANVVIG*
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Synonyms
Publications