jgi.p|Nanoce1779_2|576979, gene_326 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|576979
Unique Namegene_326
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:806688..810212 +

Link to JBrowse

Properties
Property NameValue
TranscriptId577065
ProteinId576979
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:806688..810212 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03250NO01G03250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576979mRNA_326-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576979mRNA_326Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|576979

>mRNA_326-protein ID=mRNA_326-protein|Name=jgi.p|Nanoce1779_2|576979|organism=Nannochloropsis oceanica|type=polypeptide|length=1098bp
MPPPLLPSTLRHESAKAHVAVEIEGHHSHREGKKAVPLPPSPQTRSPLLS
IPLIRSRTVERLGSVTMLAVVDDELLVADAPSPEEVFLLNPKKAQEASAS
TVLQIMREPGSMSSHSPSSSSVAAAIMFESPTWTQHLPSLKPLGFSCLAL
AEMEGRQCTTQQQWAMLGSTAAATQTAATPVAALIDFVRNDSSSQSQAYL
GQLARGIGFSAADDLRPYFCERGRLLVVAPHLVDARACEDVSASSLAETR
ARGTLQPHMTSVVWEDLRRRAATGTGVGDGNSGEMQLLSAGTPSLALPMC
LEYFDGSVISHLTAEDRRLIVAAWNAWALEDYHVVCFSYTPIPPVLARRF
ARRHLSDPPFYLVDNYTEAQQLAHLDAIREQALQEREARMLARQTAATAE
GHDGGMEQQAGSNREGTEEGVADAGKSAKATATVNVDPLERRKEDPPPSS
FTRRGRLIHGQGYGQPSPSSSGFETPSSQGSSGSVRGEVNAGFLSGAVKS
RLLASAQASTSMPDLLRRSTEPILGKATVRSFPMPAPSPSKNYIEENSGT
YSDGGGMTGMVRHNQGHGQDDDMLWGLLRRQVFLGMVASSMLPRQEVPGL
VEEMMASGVRFLFFSPRNMRRTKKLAEQMGIAMDWNAAVSLRPSVAQVPS
SHLIVGRGDVYGDWATKSRLPHGTAAIREHLRNVDNVPLLVSLYTDATPP
TINEMFVVFQEYHESVLCVGCGFRCTNTQLFRRADVAIAMGGVPGGLHLT
GAVAPFATGAAAGLLPRDIAFNEALVGLFCAFRLGAAADGTVASLAVLTD
IVKESRRLLGCFYQCVSLGTTILITVALCVVLPHLFPLPVASTRGQWSLA
DTLWVLWVILPLLVLPLLVTPADAGLLGRCPRKNVFKPNEHNAFRSGRAL
VLRCLSTILLCLYVHARCLASLLLRLPDVVTACRLPAGRPPSIASATAEW
WAVLACSEHFTLLRQGHGEVSACYWVAHDLLLVSLALCWTVQSSSFLHRT
ATLREESPLRNFAWVVGGVCLVVGQTLHFVIRGLNNVGSAGLGAIGWDVW
LMVVGVAPWVGLASAEYAKRLDAEVWNRHARFRRLEFATRLGMHSPK*
back to top
Synonyms
Publications