jgi.p|Nanoce1779_2|585081, gene_3255 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|585081
Unique Namegene_3255
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:1020255..1026875 -

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Properties
Property NameValue
TranscriptId585167
ProteinId585081
Product nameGlucose / Sorbosone dehydrogenase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:1020255..1026875 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016901oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0048038quinone binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04390NO05G04390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585081mRNA_3255-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585081mRNA_3255Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|585081

>mRNA_3255-protein ID=mRNA_3255-protein|Name=jgi.p|Nanoce1779_2|585081|organism=Nannochloropsis oceanica|type=polypeptide|length=984bp
MHISVLGIALVLATLWSSSRAQVKISQPDLKLQTVWDNIWGVVQVVFLAD
GKVMTVHKTGELHVYKSIQSKAQDYVTLLDIKDEVYSWWDHGLLSATLHP
QFPQQPYLYIAYSSEFPGRSWGDQCEPDPKKVGMTNPPDTRPYCKTMAKL
VRLKVDADLTTAVVDQELFRDWCSSTYTHHVGTMNWLEDGSMVYGAGDGS
HFQGLDHGMPQDECTDPKGPKDQGVFSSQKDAYLRGKFLRIKPASVLKKD
YLKEWVDFVQISKGARNPFRSVVDPKNGDLYFGDVGSSVWEEINRIPNPL
AADYTKKNFGWPCVEGNNAVSEIYQTWLRAEGLLSTCQDVYDGNFNKPVY
SYRYGAVDPDFPDECTEADASVSGITFYTGDKLPTRYQGKMFFVDYSKKC
GFWFDQAGDGSPDFSHAHAFMTTAGAQAGGVTDVKTGLDGYLYVVDYAGG
KLYRFSDANDARTDALATGGQAEEEGGETAMWIESTPNTYNWQYGDVVTY
KLMTPPGSPPLDPKNVTWRVTNGHCVKNPCTGTNDCHVHEVSLSTDSLTG
LSGSFRPSPHPMESFINILARVGMPDGSTQKVEFTSHALSYNYKLTSDPP
GLPIIIEEFVCLASPCITSQMAKTNPGFAAQNVQVYQDEIYKFSYWTATS
VSTNKVKKVSRTIFEETADGDYTVQAHYQKTNMAGVDDPLLGIPENVMAE
GDYERVSLKWDAPTPGPNSPDFIIISIKDAATGLLVKDHMTTAAKGNVVL
PLPTAAAAYTVDMSYLSSAKNVRGVRSPPLPFQTQAALTKGTAACLAGTQ
FTESLHKSTREGLGDLYQIGVLGTYPTTLTQGQKVRLTFGVVSETATQLM
VNILKKDDFTWAAGKIVNVPAKTNKLMNVEFTVMSEIRNKEEYFIDALLL
QDAKDYKTALVEDTSANRIFGVDIPDAVGVTAAGATTAATAAAAASGQQQ
PPRPLEGAAGTGAGVGMPGAPLQPAAVVAAANP*
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Synonyms
Publications