jgi.p|Nanoce1779_2|669941, gene_3158 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669941
Unique Namegene_3158
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:804018..808080 -

Link to JBrowse

Properties
Property NameValue
TranscriptId670027
ProteinId669941
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:804018..808080 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03490NO05G03490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669941mRNA_3158-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669941mRNA_3158Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669941

>mRNA_3158-protein ID=mRNA_3158-protein|Name=jgi.p|Nanoce1779_2|669941|organism=Nannochloropsis oceanica|type=polypeptide|length=970bp
MPMISSPTPPSLSHSWSPPLTPSPSPTTTTARSFPRHAVFLMTLSTINFL
LLVLLQHLMAQLSRDSFLSSQILKREPWELRHRSLRGGNMLVPTTSNTDG
GQVIGGVPWPPQPGPLSSPATHAFYAQQSHGLLSAALFGQANRDNKIQDR
LYNHMPLYAKLQAQAEDPATVASMQSGLRTPVYQDLQTQVADPSYKARLQ
TQMYRAAPRYVRMESYIQDPSYVTDMQQRLYRGIFRPGPDNPPRISAIAT
AEEMMPAKDVGKQERIGDLFSLPAMVKTRSSDVPASTYVEDGARPCSQER
KQHAYKRMVEYVAKVKDLETQNRELRVQVQQQGRGSVAGSTKPSSSSSSG
SRWGSARVSSPESKELHKLRQENKALETKVKDARRVNQELREQFNESFED
AKSKFRSQGRIHGNQMAAKKAEELSAQIAYLKDALERLTKTNKELETESR
RLKKEGRDGSELRSQVEELREELLRARQHQSNLERNVENLQDEKENLLRE
LEHQDGRKSLEVVEEGDRPRVVELESEIRELKEVVERLRLELEGRIYAEG
EQDRLKEEVEDLKTRLRAAMTKLAEQAQGHASVVEEREKDYDQVVAALEE
VKAHVRREEGRGQELQEEVERLTKAQNAAEDRVRRLECSPSRTQGEADAA
ILSVLGKDIDRMERANERLGQEVSDLEADKAALEEEVRNLNFDHEAERKQ
AVATLAKEKKALQREIDRLTGELEEADAKITQAHAEAAAAQADALEAVAS
RDGSSAPEERRKGKDETEMEEDVLHLQEENAVLQREIETYRELAASQDLQ
FSLVYIQEVNTYEDYLVIENRTNLDVSLAGWSLAGALSSDGTGEYEMKFD
FPDELMLSAGSKVTVWWGPKNLGFKLHPTRGNVYWEGSDKYDIFQPQDDA
VLLQDAEYCEMSRMRIINGKRRARAGPMAPSPSSDAKRARTSYPPSPLGE
AGLSSGRGGGGGFGMRTLY*
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Synonyms
Publications