jgi.p|Nanoce1779_2|629373, gene_3111 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629373
Unique Namegene_3111
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:678629..683407 +

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Properties
Property NameValue
TranscriptId629459
ProteinId629373
Product nameAdaptin N terminal region-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:678629..683407 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030117membrane coat
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03050NO05G03050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629373mRNA_3111-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629373mRNA_3111Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629373

>mRNA_3111-protein ID=mRNA_3111-protein|Name=jgi.p|Nanoce1779_2|629373|organism=Nannochloropsis oceanica|type=polypeptide|length=1331bp
MFEKSLQDLVKGIRSHKHDPSAFISQSIQEIKQELRNVDPFVKAQAVRKL
TYLQMMGYDMSWASFAVVEIMSSPRFAHKRIGYLAACQTFTDTTDVVLLT
TNLLKKEFQSPNQYEVGLAVNCLANIVTRDLARDLIGDIVGLIGHSKPYV
RKKAVLSLYKLYIKYPQGLRLTFERLKEKLEDPESAVVSCAVNVICELAH
KNPTNYLALAPKFFRLLTTSSNNWMLIKVVKLLGSLVSEEPRLARKLLEP
LATIIQNTAAKSLLYECIHTVTLALPFARKPGDQSNSEGGRNLQAVVALC
ADHLRQFVEDPDQNLKYLGLVGFVDLMKSFPRIVVEHKELVLQCLSDDDV
TIRMRALELLTGMVTRRNLTELVHKLMQHVLLAEGPYRDEIIQKILFMCS
RDKYAYLSDIPWYVSVLVDLAYVQGPVHGPLVAAQLIDVAVRAEAGNMRI
NYPGRGGGGDEDEDEDEEGQEEGFPSASAAAAAGTAKVFAQVLAAYLDPK
VTNLPEDVQVVYMQNALKVLAVATRHVSDDDELEGLLMILRVRLPVFLQS
VHIEVQERATTLKNLLTCLGVLPKQPGGGGEGEGEGEGKEEAGERCEGGL
KKRGMQDGKGQAVNLLGMDLMGNEDDTNADGSTTKQDGASSFMNLNNSNS
SSSVNSVRAIRLCQALLSALFAEQLQPVNPKAQKKVPVPEGLDLSSPLDP
SGLSELEAYTGGFPRDPDLARVTFTHVFVAPEPVIEERGKEGGRDEMEAA
FGSPHRLPRGGREGGGIYVEASSPGYQPGDVSRQKWQTTPFYLTSTSVAA
GEGENGGESEVTPPSFHLTAADLEGRGRRQRGEGGREEGRKGRRKSGMKG
GHRRGQPSGSSDSISGGAVLVLRDEVMPEGAVDSDSEKGGGKNGKRGGRK
GHEEADSASPLIDLRDFEAGNDSPPSFFSSSSISSFAKPRNESKDVLRLK
ADAMDLLQFGNSSPLHPPTTTAGGEAAATACVLRGEERGEEGGRLLGRGR
GEKVTEQRRKEKGSGSSRRSSGKKNSKREESLLDLNGGGGEGGEGNGVAA
GPSSFSRLRFPLIKVAGLRVDYSLALDVDHHQLTVHFRVKYPSTSSSSSA
ISDLRLYLRPLPPGFTSPLSIGGLSIGGGAGVMISKIAPGETAKAFLKLR
FPLQVPPTTLTMPFEMDHFRGKEGREGGDLLVPTSPARAKKERGELVLPA
CAFLCPGHLSPSGFMSLLSQGQVQWQEATVRLPLRSRSSGSKKRGGAEGF
DAVVAHLATFFQSQIVETTPPAAAALYSTVVGGKEGGQEHHVALLAKFVD
GGEMVEIALKSDMPGLAGVLAAEAKALCTF*
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Synonyms
Publications