jgi.p|Nanoce1779_2|629353, gene_3088 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629353
Unique Namegene_3088
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:629320..633634 +

Link to JBrowse

Properties
Property NameValue
TranscriptId629439
ProteinId629353
Product nameDomain of unknown function (DUF2431)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:629320..633634 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02830NO05G02830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629353mRNA_3088-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629353mRNA_3088Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629353

>mRNA_3088-protein ID=mRNA_3088-protein|Name=jgi.p|Nanoce1779_2|629353|organism=Nannochloropsis oceanica|type=polypeptide|length=564bp
MKRKHDEILSTAALKVLVLGDGNLSYSLGLAERLTGAQVLATSYDDSQEV
FTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEK
KGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTA
LLAHFLESCKAVLAPPSLTQGQEGGQAHVTLAGDQCKRWKLFETAERLGY
ELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSS
HPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSK
DAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEVSQQGQARR
VLRGFSHTLRGPCSLADISLFSVFLLRKSISITDVHIHKSTKLCNQIQAE
DLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKG
DTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQQQQQEQRKFVLCPVCDYY
VTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEEK
MRGDTDSEEKETV*
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Synonyms
Publications