jgi.p|Nanoce1779_2|669860, gene_3053 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669860
Unique Namegene_3053
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:553054..557124 +

Link to JBrowse

Properties
Property NameValue
TranscriptId669946
ProteinId669860
Product nameSKIP/SNW domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:553054..557124 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02500NO05G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669860mRNA_3053-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669860mRNA_3053Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669860

>mRNA_3053-protein ID=mRNA_3053-protein|Name=jgi.p|Nanoce1779_2|669860|organism=Nannochloropsis oceanica|type=polypeptide|length=721bp
MGLGGEEGEAYEGVGRPVDADAAAGDDDGGGGDVSTPSLLHRTSSSFTRG
RVTTTGKTMATLGLSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPIPP
YGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIV
SVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEE
EAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPG
FNSNAKQRVIELVEAQVDPMEPARHKHKKVPRGPPDDPVPVLHSPPRKVS
VEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALP
QALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGI
NVAAGEGGDGGQRREREESYYGRGAAGGGGGGRGGLAERLVGEERGGDEE
EREERRGPSERGGEGEGGGLHTSEEERMAAVQRDKLRLERRKELERDMRK
DNMRGAMRKGKMDRDGERDISEKIALGMHVGNAKLTGDEVYDSRLFNQGG
GVEAGFGGEDEYNVYSRALFDKGAGGNIYRPRGDLGVGGLDEDGGQEADA
QYRKIANSDKFKPDRGFAGADYQSGGQGRDKPVQFEKDGGREGGKIGEGK
EDEEEGDFFGVGEFVEKGGKRKDPLGHIGGGGRGIMSASSAGSKEELEEE
GGGKRQKIVFTEARNGRRRD*
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Synonyms
Publications