jgi.p|Nanoce1779_2|576873, gene_305 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|576873
Unique Namegene_305
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:748535..752419 +

Link to JBrowse

Properties
Property NameValue
TranscriptId576959
ProteinId576873
Product nameGlucokinase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:748535..752419 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004340glucokinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03040NO01G03040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576873mRNA_305-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576873mRNA_305Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|576873

>mRNA_305-protein ID=mRNA_305-protein|Name=jgi.p|Nanoce1779_2|576873|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MSHLVVGGDVGGTNSRLALYKIPASKLALIEGRTPPGTIVYSKWYRNSEH
ATFTDVFKTFLQEAAEAGAAIKEISTACLAVAGPVGNNEVTMTNRGRWVI
NGEQLVKELGLKRVQLINDFVALGYGLLTVDRSNPNEVCVLQDAPVQPGA
PIATIGAGTGLGECFLTPGDGGHYVAYPSEGGHAEFPPRTETEFQLLEFL
KRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDKVDESVDAAFRAAGEL
GGKVVSENAKAGTLAGMALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLT
PKNIDRIAGNDSLFMAAFQDKGRVSPFLKKIPLYAVLVEDLGERGAQWVA
IKVLLEHLNGAPPRRGALKGSSSGTSNGIPFWCTHTAVAMLGGALLATLS
VLALKAKK*
back to top
Synonyms
Publications