jgi.p|Nanoce1779_2|584040, gene_2975 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|584040
Unique Namegene_2975
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:381571..388982 +

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Properties
Property NameValue
TranscriptId584126
ProteinId584040
Product nameABC transporter family, cholesterol/phospholipid flippase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:381571..388982 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01840NO05G01840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584040mRNA_2975-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584040mRNA_2975Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|584040

>mRNA_2975-protein ID=mRNA_2975-protein|Name=jgi.p|Nanoce1779_2|584040|organism=Nannochloropsis oceanica|type=polypeptide|length=1724bp
MTQETVGCLYANCAFQYTVPTTNFLVNPFQKPAKADFMFGYTYSAFSTLQ
KSVDDFILNSVSTQGPVETTISLGLFPEPAFHSDDFLTVIAASLALFFVL
AFLYPVSRYLRALVLEKETKIKETMKIMGLSAWAANLAWVITMVAQSSVT
VLLMTLLGARTVFSYSNSFLIFLFLFVFSLALVMFVFLVSTFFSKAKTAA
TAGTILFFATFFPYYALTGPGTAGPRAKAAACLLAPTCLGLGADVLAAFE
GGLMGLQWDNIHVQPGETNFSFTAAIGMLLLDTVLYGLLAAYLEAVLPSE
FGTHLPFYFPLLPSYWEGLWKRLRWSWRRCLGGRGTVDDDSAAAAGEVGQ
PLLTLAEDYEESDRYEMEGEGAIVEGDEEDAPLIEPVDPELRRQAVEGRS
LIIRNLRKVFETTSGNRVAVDRLNMEMYEGQITVLLGHNGAGKSTTISML
TGLLPPTSGDARVRGLSMTRDMSGIRQQMGLCPQHDTLWPELTVTEHLEL
FGVLKGVKPGRALKEEVAKMISEVGLQDKALVESCQLSGGMKRKLSLGMA
LIGDSKVVLLDEPTSGVDTYSRRQIWGVLERNKRGRVMLLSTHFMDEADM
LGNRIAIMADGRLKAMGSGLFLKSRYGVGYTLVVVKEGQTVPSAPIEAVV
RAAVPAAEVTSEAGAELAFRLPFEASPAFAGLFRELDARKALGELRISTY
GISVTTLLEVFLRIGDDRVNAHGSPRTPLLPPSAAAAAAAETEVEKKSKS
TYKNDMALVARPERGNASFSRHMKALLIKRYIYATRDRKSQCCQLVLPAL
LILFGLSLIKLLGNPLIQDNLVLSPLMLNPNFAPEARNPFPVLATSPAAR
AIMAELDVSRGLSASYIDVAAATAAAANAEEDPFKACAVGATEVLAMSSY
LASTAIEGKSGPASRYGALTFANTTDATHFTYNLLLNASALHGAGVYMNL
VSNAILRTLLGVEAGADSSSLPSIITRNHPLPLTHEEERASFLIEGNTAS
TFVLIGLSFISASIAIFIVKETESKAKHQQIISGVSLLAYWLANFAWDVL
SWLPPLVITLALMYAFQIDSYTTGEAAGAFVLLFVAFAPAATAFTYVWTF
CFSSHSAAQTVILFLNFLTGLVLSIVSFVLSLIDSTRAINIKLRYVFRLF
PAFCFGDGLLQLALCVDDVCPKISAAGISITEPLTPLHWDVTLADVVFLL
VESAIYFLITLLIEHARAQPWIAALAAWRPAWWGFWRKKTRALQEGKAKK
DREESSEDKRGGSVRDGGAGAEEDEGEDEDVTAEAERVLSGASKRAKDVV
RLEKLRKVYQTPQGPKVAVRGLSFGIPRGETFGFLGINGAGKTTTLSMLS
GEFPPTSGAAYVAGHSITTEQNKLRKNIGYCPQFSALIDALTTREHLVLF
ARIRGLSEAEIPSLVVAKMKEMDLLDFADKAAGSLSGGNQRKVSMAIATM
AEPLVVFADEPSTGMDPSSRRKLWDVLSAIRAKQSSIVLTTHSMEEAEAL
CTRIAIMVSGKLRCLGMPQHLKSKFGEGFELEVKLHTPTPAELASIGQER
LGRIGNSSNRSSKLSQTELNNACVDWGRPEWAGLVTERGSGATLWALLRD
GGRVPQATVVEWLVAEEGARRLDGFLREQFGEGVKLIERASWFTSRFSLP
VRAVTGEGGREGGGGGRTLSLADMFERLEAGKVACGIVEYALGETQIEVI
FNRLCAEGQTEEETREEEEEGNV*
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Synonyms
Publications