jgi.p|Nanoce1779_2|526752, gene_2929 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|526752
Unique Namegene_2929
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:273398..278950 -

Link to JBrowse

Properties
Property NameValue
TranscriptId526838
ProteinId526752
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:273398..278950 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005086ARF guanyl-nucleotide exchange factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0032012regulation of ARF protein signal transduction
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01390NO05G01390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526752mRNA_2929-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526752mRNA_2929Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|526752

>mRNA_2929-protein ID=mRNA_2929-protein|Name=jgi.p|Nanoce1779_2|526752|organism=Nannochloropsis oceanica|type=polypeptide|length=1328bp
MAAPAQLSTFSPIRRASLHSLKPLAIFSSPSAATAEFSTRSLCFPPPLSS
GPADAPLVDIGAVFGSDVVPEGFIRVATTPYGRKADLNSGAGGHYIYLIL
RKDRLTRRRPPVVGLTIIFPDRKEFVPPTFSVVRRRGEPVDFNAGTRGER
VFLCFKRGAGNPITDIQVIFPKKKESVPLGYTLVERTPFKYEADLNAGGA
KGGVGSVSVSGSNTIFICYKQRLRNVDDLRSVAGGEGTAPAPASAPAVPA
ADKDGKREGGGMMEGIARTSSYEAGLLIRTLLTPLVMALYLGSGEVTAVA
LREVVGLATRHLSSEGGKEGREGEGPCSLQGFVIEALCFFVHRVHVEHFD
TVVQYFRSVIQASAVAEMDLSSQTLQQIFTTCVFLCNFEAFRALENERHA
RLAAPPTHRLEQQRQRRRRQRRRQRQQPQHRIGGMVKSLVVVVVDDAIQY
VELTKATQRAVDYIKRGSASSHESFWKELLAVSAVITTSPAEENTFLLLA
ATCKLASESPRRIGAGGQLVERDVASKLLALELLSTLLKKTGDRFQHAAI
FGTQIRRLVVSCLLTNTVTGLQDLRVQRRVLSLITLLWRLYRRFCKVECG
LLIETSLLQPLRFLPSPALVPRQTAIMNEFLHWLEVFPQCLVELYLNYDL
DRKSYLSVQQPLPAFEESVATVCALGEDLGGHLVANEEDPEMRLLHLRTL
AAVKELTRALMNASGHAHLISRDSKVREISLMGSGGGVGGGQGGGWEHDV
MVGPTGSIGKMVGVPPRPSLPSPLPHATDAATASPASATAIASSVRVRQE
LQKKQDEILTQALTLYRAKGLKKAVQYLVASSFISDTPRDVASFLRVYRD
LLDPEAIGDYLGEGGNVHDAAYWNLLRLSYIRAVSFHNMTLEQALRHFLT
RCGFRLPGEAQKIDRLISVFAECYFQDNEGMPCCPFSQADTPYILSYAII
ILQTDLHKVGGGKGGRARGRRGKLNKPMSKEAFINNLRGVDESPDLTREY
LSEIYESILAHPIEMNLVVMGVGGTGGGSGGGSGGGVDYRLHHTSAEVAQ
AVRDADEFLRGLAVYPNRFAFVGVNANLTPDLVKLMYEGVWFHVHGLVHA
VLQNPTQSDPEAILTCLDVVQSMLCAAMFLGLRPQRQSFAGLLSKFKMEQ
ERMAFGFGISSGTMNGNGRLECTSRNGINRTGSSSKGDGAWNAIGQVHAL
VTDLKDSVQQSRLREELKAVAKRIEARAKLLEGNRRFLREGDLVKKCRSG
KRKVYTFFLFSDQLLYTHRGFGGEYKVHAFLLLSLTKVSNVEDRRNCSFQ
IHHPQKSFTVVAESPEMKRVWMRDINEA
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Synonyms
Publications