jgi.p|Nanoce1779_2|581719, gene_2820 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|581719
Unique Namegene_2820
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:1283087..1285079 +

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Properties
Property NameValue
TranscriptId581805
ProteinId581719
Product nameLipopolysaccharide-modifying protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:1283087..1285079 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000009alpha-1,6-mannosyltransferase activity
GO:0000026alpha-1,2-mannosyltransferase activity
GO:0000030mannosyltransferase activity
GO:0000033alpha-1,3-mannosyltransferase activity
GO:0001962alpha-1,3-galactosyltransferase activity
GO:0003980UDP-glucose:glycoprotein glucosyltransferase activity
GO:0004376glycolipid mannosyltransferase activity
GO:0004576oligosaccharyl transferase activity
GO:0004583dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0008375acetylglucosaminyltransferase activity
GO:0008376acetylgalactosaminyltransferase activity
GO:0008378galactosyltransferase activity
GO:0008417fucosyltransferase activity
GO:0008755O antigen polymerase activity
GO:0008921lipopolysaccharide-1,6-galactosyltransferase activity
GO:0016759cellulose synthase activity
GO:00187159-phenanthrol UDP-glucuronosyltransferase activity
GO:00187161-phenanthrol glycosyltransferase activity
GO:00187179-phenanthrol glycosyltransferase activity
GO:00187181,2-dihydroxy-phenanthrene glycosyltransferase activity
GO:0019112phenanthrol glycosyltransferase activity
GO:0019187beta-1,4-mannosyltransferase activity
GO:0031278alpha-1,2-galactosyltransferase activity
GO:0033556dolichyl pyrophosphate Man7GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0042281dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0042283dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0045140inositol phosphoceramide synthase activity
GO:0046527glucosyltransferase activity
GO:0046920alpha-(1->3)-fucosyltransferase activity
GO:0046921alpha-(1->6)-fucosyltransferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581719mRNA_2820-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581719mRNA_2820Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|581719

>mRNA_2820-protein ID=mRNA_2820-protein|Name=jgi.p|Nanoce1779_2|581719|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MFTQNFTQPIYDWMESKEVEEMAAIPWEKKLDIAIWRGTQTGGAYTLENW
RNFPRSQLVLFSQQHSELIDARFSGFTQVTEDARKDILNASAVGDAISML
EFGRYKYIINMDGNGWAARLPFLFALGSTVLKEESNYMEFWYSSLKPFVH
YVPFKSDLSDLEDNIKWMREHPRMAKRIGEHGRQFVLETLREEAINGYAG
CLLTTYAQRIFYDIEKVEGAIEVDLTRFS*
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Synonyms
Publications