jgi.p|Nanoce1779_2|669316, gene_2802 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669316
Unique Namegene_2802
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:1227083..1236780 +

Link to JBrowse

Properties
Property NameValue
TranscriptId669402
ProteinId669316
Product nameWD40-repeat-containing domain protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:1227083..1236780 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04520NO07G04520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669316mRNA_2802-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669316mRNA_2802Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669316

>mRNA_2802-protein ID=mRNA_2802-protein|Name=jgi.p|Nanoce1779_2|669316|organism=Nannochloropsis oceanica|type=polypeptide|length=953bp
MQESKLDAPVVQPSNTDLPRIHHSSKMDAMLKNIDKDTLKKGADTVVDKA
AEQLSVDAATAEKAKGAAHNAIDKADIEQLKAAVPQAAEAMKNLLDKQRQ
TLLVVAIELTLSVVSLIYITLVQGRPSGTTAMEEARRKRAAALEEKKKRL
EEMRKKRAEREGGGGRGGIGGIGGEASVEEVSASARPPPRLTTRTSDRAA
AEGGQKGLEEEGNEQLDALIDSLLSAPPPSIVSSMEEEAGEEGGGEEGKD
GCVDEKKRTRTIPSSCKGDANVIGALASPEGGMGVSLSVVQALGKIVIPP
APAVECYDKSTQTDLLFEEEEEEEEEEEERRRREDRKAQASAGGGQRGKG
KGGREGGDEEEEEGEEEKEEEGGEGGDGTRLAENESAGSPAAKNAGSVKP
SMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGREE
EGGEEKRKRESGGGLTRLLQFSVARRRRRRSSSSSSSTSSSGNSREGARV
GGEMEGRRAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNSFSFSSS
PSFPPSAAASFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSD
PHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDS
IQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPPSSSCSSRSSC
REQQQQQQQPPRNVSITAFTLQRDGKWEGHNGLITGLSQHPSSLSSSFPS
SSSSASSRSALGPLVLSSSVDWTIKLWDTQRPQCPLLASFSHGATCYDCV
NDVAWCPAHPAVFASVTSGGHLGLWNLNQSLEPSSALTRVCWSRDGRKLA
VGDTTGNVHVLGVAEEVRGGMRDGWMEGGRARSSSSRSSTSSTSSSSSSS
SISSSSSSSSSSSSSSTSSRSSSSMSSSLSCNSNNSSINSNNNSSSSSSI
IR*
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Synonyms
Publications